Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS09960 and ABZR87_RS09965 overlap by 11 nucleotidesABZR87_RS09965 and ABZR87_RS09970 are separated by 29 nucleotidesABZR87_RS09970 and ABZR87_RS09975 are separated by 423 nucleotidesABZR87_RS09975 and ABZR87_RS09980 are separated by 74 nucleotides ABZR87_RS09960: ABZR87_RS09960 - ABC transporter permease, at 2,117,133 to 2,118,140 _RS09960 ABZR87_RS09965: ABZR87_RS09965 - sugar ABC transporter ATP-binding protein, at 2,118,130 to 2,119,710 _RS09965 ABZR87_RS09970: ABZR87_RS09970 - sugar ABC transporter substrate-binding protein, at 2,119,740 to 2,120,699 _RS09970 ABZR87_RS09975: ABZR87_RS09975 - Fe-S cluster assembly transcriptional regulator IscR, at 2,121,123 to 2,121,716 _RS09975 ABZR87_RS09980: ABZR87_RS09980 - IscS subfamily cysteine desulfurase, at 2,121,791 to 2,123,008 _RS09980
Group Condition ABZR87_RS09960 ABZR87_RS09965 ABZR87_RS09970 ABZR87_RS09975 ABZR87_RS09980
carbon source Lauric (C) -0.6 -0.5 +0.2 -3.2 N.D.
carbon source Octanoic (C) -0.4 +0.3 +0.4 -4.1 N.D.
soil soil EcoFAB sample 2; outgrowth in LB +0.3 +0.1 -0.5 -1.9 N.D.
carbon source Octanoic (C) -0.5 +0.2 -0.3 -1.3 N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.4 +0.3 -0.3 -1.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +0.7 -0.3 -1.2 N.D.
rhizosphere rhizosphere sample 5; outgrowth in LB +0.8 +0.6 -0.5 -1.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.4 +0.1 -0.2 -1.2 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB +0.9 +0.7 -0.5 -1.1 N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB +1.1 +0.4 -0.2 -1.0 N.D.
carbon source Azelaic (C) +2.1 +1.6 -0.7 -2.4 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.0 +0.0 +1.1 -1.3 N.D.
carbon source Hexanoic (C) +0.9 +0.7 +0.1 -0.7 N.D.
carbon source Hexanoic (C) +0.9 +0.8 -0.4 -0.3 N.D.
root root EcoFAB sample 1; outgrowth in LB +0.7 +0.7 +0.4 -0.7 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +2.3 -0.0 -0.3 -0.8 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.4 +0.7 -0.4 -0.4 N.D.
carbon source propionate (C) +1.3 +0.7 -0.1 -0.5 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +2.2 +0.4 -0.5 -0.2 N.D.
carbon source Sebacic (C) +1.6 +1.1 +0.3 -0.8 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +1.3 +1.3 +0.4 +0.0 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +2.3 +1.0 +1.6 -1.5 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.4 +0.5 +0.1 +1.6 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +2.9 +0.7 +1.7 -1.7 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +2.0 +0.7 +1.6 -0.8 N.D.
carbon source Sebacic (C) +2.6 +1.9 +0.6 -1.0 N.D.
carbon source Dodecandioic (C) +3.5 +2.8 +0.0 -0.9 N.D.
carbon source Heptanoic (C) +3.3 +3.0 +0.1 -0.9 N.D.
carbon source Dodecandioic (C) +3.7 +2.8 +0.0 -0.5 N.D.
carbon source Heptanoic (C) +3.0 +2.8 +0.4 -0.1 N.D.
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