Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS09930 and ABZR87_RS09935 are separated by 205 nucleotidesABZR87_RS09935 and ABZR87_RS09940 are separated by 337 nucleotidesABZR87_RS09940 and ABZR87_RS09945 are separated by 159 nucleotidesABZR87_RS09945 and ABZR87_RS09950 are separated by 2 nucleotides ABZR87_RS09930: ABZR87_RS09930 - polyhydroxyalkanoate depolymerase, at 2,107,723 to 2,108,994 _RS09930 ABZR87_RS09935: ABZR87_RS09935 - amino acid aminotransferase, at 2,109,200 to 2,110,396 _RS09935 ABZR87_RS09940: ABZR87_RS09940 - excinuclease ABC subunit UvrB, at 2,110,734 to 2,112,824 _RS09940 ABZR87_RS09945: ABZR87_RS09945 - recombinase, at 2,112,984 to 2,115,068 _RS09945 ABZR87_RS09950: ABZR87_RS09950 - ribokinase, at 2,115,071 to 2,116,036 _RS09950
Group Condition ABZR87_RS09930 ABZR87_RS09935 ABZR87_RS09940 ABZR87_RS09945 ABZR87_RS09950
carbon source Lauric (C) -1.1 -4.3 +0.4 -3.4 -0.3
carbon source Heptanoic (C) -0.9 -4.6 -0.5 -2.0 -0.1
carbon source butyrate (C) -1.2 -4.7 -0.5 +0.1 -0.6
carbon source Sebacic (C) -1.6 -3.9 -0.2 -0.6 -0.5
carbon source Dodecandioic (C) -1.1 -4.0 -0.1 -0.8 -0.5
carbon source Dodecandioic (C) -1.4 -3.4 -0.3 -1.2 -0.0
carbon source Heptanoic (C) -0.6 -3.6 -0.5 -1.6 -0.1
carbon source Azelaic (C) -1.4 -3.3 -0.0 -0.9 -0.5
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.7 -2.6 -2.1 +0.0 -0.5
soil soil EcoFAB sample 1; outgrowth in LB -0.7 -2.4 -2.3 +0.3 -0.9
carbon source Protocatechuic Acid (C) -0.1 -5.1 -0.1 -0.1 -0.1
carbon source Hexanoic (C) -0.3 -4.1 -0.3 -0.3 -0.4
carbon source Pimelic (C) -0.4 -4.9 +0.1 +0.1 -0.3
carbon source D-Glucose (C) -0.1 -4.9 -0.1 -0.1 -0.0
carbon source D-Glucose (C) -0.3 -5.0 -0.1 +0.1 -0.1
carbon source D-Galactose (C) -0.3 -4.7 -0.1 -0.1 -0.1
carbon source Pimelic (C) -0.1 -4.6 -0.2 -0.2 -0.2
carbon source Octanoic (C) -0.5 -3.6 -0.5 -0.6 -0.1
carbon source Beta-alanine (C) -0.3 -4.6 -0.1 -0.0 -0.2
carbon source Trans-2-methyl-2-butenoic (C) -0.1 -4.4 -0.4 -0.1 -0.2
soil soil EcoFAB sample 2; outgrowth in LB -0.4 -2.6 -2.1 +0.2 -0.3
carbon source Trans-2-methyl-2-butenoic (C) -0.2 -4.5 -0.2 +0.1 -0.3
carbon source D-Galactose (C) -0.3 -4.9 +0.1 -0.1 +0.1
carbon source 3-Hydroxypropionate (C) -0.1 -4.7 -0.2 +0.1 -0.1
carbon source D-Glucose (C) -0.5 -4.2 -0.2 +0.3 -0.3
carbon source Glycerol (C) -0.1 -4.8 -0.1 +0.2 -0.1
carbon source Pimelic (C) -0.2 -4.8 +0.1 +0.2 +0.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB +0.4 -3.1 -1.6 -0.3 -0.2
carbon source propionate (C) -0.5 -4.6 +0.2 +0.4 -0.1
carbon source D-Glucose (C) -0.5 -3.8 -0.2 +0.5 -0.3
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