Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS09895	ABZR87_RS09900	ABZR87_RS09905	ABZR87_RS09910	ABZR87_RS09915
carbon source	Octanoic (C)	-3.6	-0.2	+0.3	-0.2	-0.9
carbon source	Octanoic (C)	-3.6	+0.2	+0.1	+0.1	-1.2
soil	soil sample 5; outgrowth in LB	-3.9	+0.1	+0.0	-0.1	-0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-4.1	-0.1	-0.0	-0.1	+0.5
soil	soil sample 1; outgrowth in LB	-3.5	+0.1	+0.2	+0.1	-0.6
soil	soil sample 4; outgrowth in LB	-3.5	+0.1	-0.0	-0.4	+0.0
soil	soil sample 2; outgrowth in LB	-3.9	+0.2	+0.1	+0.1	-0.1
carbon source	D-Glucose (C)	-4.1	+0.0	-0.0	+0.2	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.7	+0.3	+0.1	-0.3	+0.0
carbon source	3-Hydroxypropionate (C)	-3.2	+0.1	-0.0	-0.0	-0.4
soil	soil EcoFAB sample 2; outgrowth in LB	-3.6	-0.2	+0.0	+0.1	+0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.1	+0.4	-0.0	-0.4	-0.1
carbon source	propionate (C)	-3.2	+0.1	-0.0	+0.0	-0.1
soil	soil EcoFAB sample 1; outgrowth in LB	-1.1	+0.0	+0.2	-0.7	-1.2
root	root sample 5; outgrowth in LB	-1.5	-0.2	+0.3	-0.7	-0.6
rhizosphere	rhizosphere sample 4; outgrowth in LB	-2.6	+0.2	+0.2	+0.1	-0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-4.1	+0.0	+0.1	+0.3	+1.1
rhizosphere	rhizosphere sample 3; outgrowth in LB	-1.4	+0.1	+0.2	+0.1	-1.5
carbon source	Glycerol (C)	-2.8	+0.2	-0.0	-0.2	+0.2
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	-2.1	+0.2	-0.1	-0.2	-0.4
nitrogen source	nitrogen source nitrate 20mM	-2.2	+0.2	-0.1	+0.1	-0.2
carbon source	Heptanoic (C)	-2.7	-0.1	+0.2	+0.0	+0.3
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	-3.0	+0.5	+0.1	-0.1	+0.3
carbon source	1,2-Propanediol (C)	-2.4	+0.3	+0.0	-0.0	+0.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-2.0	+0.2	-0.0	-0.3	+0.3
carbon source	propionate (C)	-1.7	+0.0	+0.2	+0.3	-0.5
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	-2.4	+0.2	+0.3	-0.3	+1.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-2.2	+0.0	-0.1	+0.4	+0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	+0.4	+0.0	+1.4	+0.8
phage	Ra1_0.1	+2.3	-0.1	-0.1	+0.4	-0.1