Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS09715	ABZR87_RS09720	ABZR87_RS09725	ABZR87_RS09730	ABZR87_RS09735
carbon source	Octanoic (C)	-0.5	-2.6	-0.2	N.D.	-0.1
carbon source	Octanoic (C)	+0.3	-3.3	-0.3	N.D.	+0.1
carbon source	Heptanoic (C)	-0.4	-1.0	-0.2	N.D.	-0.4
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.1	-0.4	+0.2	N.D.	-0.3
carbon source	Lauric (C)	-0.2	-1.3	-0.1	N.D.	+0.0
carbon source	Heptanoic (C)	-0.2	-1.0	+0.1	N.D.	-0.1
carbon source	Sebacic (C)	-1.0	+0.1	+0.1	N.D.	-0.3
root	root sample 6; outgrowth in LB	+0.6	-0.2	+0.2	N.D.	-0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.8	-0.3	-0.1	N.D.	-0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+1.0	-0.1	-0.0	N.D.	-0.2
carbon source	Azelaic (C)	+0.8	-0.1	+0.2	N.D.	-0.1
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.7	+0.3	+0.1	N.D.	-0.3
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	+1.0	+0.2	-0.3	N.D.	-0.1
root	root sample 4; outgrowth in LB	+0.9	+0.2	-0.0	N.D.	-0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+1.0	+0.1	-0.2	N.D.	+0.1
soil	soil EcoFAB sample 2; outgrowth in LB	+0.8	+0.0	+0.3	N.D.	-0.2
carbon source	Pimelic (C)	+0.8	+0.1	+0.3	N.D.	-0.1
nitrogen source	nitrogen source nitrate 5mM	+0.6	+0.3	+0.3	N.D.	-0.2
carbon source	adipate (C)	+1.0	+0.1	-0.0	N.D.	+0.1
carbon source	Pimelic (C)	+1.0	+0.1	-0.0	N.D.	+0.0
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	+0.4	+0.1	+0.8	N.D.	-0.1
rhizosphere	rhizosphere sample 9; outgrowth in LB	+0.8	+0.2	+0.2	N.D.	+0.0
carbon source	D-Xylose (C)	+0.7	+0.3	+0.1	N.D.	+0.1
carbon source	Pimelic (C)	+0.7	+0.3	+0.3	N.D.	+0.0
rhizosphere	rhizosphere sample 5; outgrowth in LB	+1.0	+0.1	+0.1	N.D.	+0.0
soil	soil sample 9; outgrowth in LB	+1.0	+0.2	+0.1	N.D.	+0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	+0.6	+0.3	+0.6	N.D.	-0.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.5	+0.5	+0.5	N.D.	+0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	+0.9	+0.2	+0.5	N.D.	-0.0
rhizosphere	rhizosphere sample 3; outgrowth in LB	+1.2	+0.6	+0.3	N.D.	+0.3