Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS09710 and ABZR87_RS09715 are separated by 311 nucleotidesABZR87_RS09715 and ABZR87_RS09720 are separated by 130 nucleotidesABZR87_RS09720 and ABZR87_RS09725 are separated by 60 nucleotidesABZR87_RS09725 and ABZR87_RS09730 are separated by 471 nucleotides ABZR87_RS09710: ABZR87_RS09710 - tRNA-Arg, at 2,057,060 to 2,057,134 _RS09710 ABZR87_RS09715: ABZR87_RS09715 - hypothetical protein, at 2,057,446 to 2,057,661 _RS09715 ABZR87_RS09720: ABZR87_RS09720 - Kdo hydroxylase family protein, at 2,057,792 to 2,058,766 _RS09720 ABZR87_RS09725: ABZR87_RS09725 - amino acid ABC transporter substrate-binding protein, at 2,058,827 to 2,059,738 _RS09725 ABZR87_RS09730: ABZR87_RS09730 - hypothetical protein, at 2,060,210 to 2,060,416 _RS09730
Group Condition ABZR87_RS09710 ABZR87_RS09715 ABZR87_RS09720 ABZR87_RS09725 ABZR87_RS09730
carbon source Octanoic (C) -4.5 +0.3 -3.3 -0.3 N.D.
carbon source Octanoic (C) -4.6 -0.5 -2.6 -0.2 N.D.
carbon source Heptanoic (C) -5.0 -0.2 -1.0 +0.1 N.D.
carbon source Heptanoic (C) -4.2 -0.4 -1.0 -0.2 N.D.
carbon source Lauric (C) -3.7 -0.2 -1.3 -0.1 N.D.
carbon source Sebacic (C) -3.9 -1.0 +0.1 +0.1 N.D.
carbon source Dodecandioic (C) -3.7 -0.2 -0.6 +0.0 N.D.
carbon source Dodecandioic (C) -3.7 -0.4 -0.2 +0.1 N.D.
carbon source succinate (C) -4.1 +0.3 -0.1 +0.0 N.D.
carbon source Sebacic (C) -4.3 +0.2 +0.4 +0.2 N.D.
carbon source Hexanoic (C) -3.3 -0.0 -0.1 -0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.6 +0.0 -0.5 -0.1 N.D.
carbon source Protocatechuic Acid (C) -2.2 -0.4 -0.3 -0.0 N.D.
carbon source succinate (C) -3.2 +0.0 +0.1 +0.1 N.D.
carbon source propionate (C) -3.4 +0.1 +0.3 +0.1 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.4 -1.1 -0.4 +0.2 N.D.
carbon source Protocatechuic Acid (C) -2.6 +0.2 -0.2 -0.1 N.D.
carbon source propionate (C) -2.9 +0.4 +0.2 -0.1 N.D.
soil soil EcoFAB sample 2; outgrowth in LB -3.1 +0.8 +0.0 +0.3 N.D.
carbon source Hexanoic (C) -2.4 +0.3 +0.1 +0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -2.4 +0.7 -0.3 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.2 +1.0 +0.1 -0.2 N.D.
root root EcoFAB sample 2; outgrowth in LB -2.1 +0.6 +0.0 +0.1 N.D.
rhizosphere rhizosphere sample 5; outgrowth in LB -2.4 +1.0 +0.1 +0.1 N.D.
carbon source Azelaic (C) -2.0 +0.8 -0.1 +0.2 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -2.4 +0.6 +0.3 +0.6 N.D.
carbon source D-Xylose (C) -1.9 +0.7 +0.3 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.8 +0.5 +0.5 +0.5 N.D.
carbon source Disodium Glutarate (C) +2.9 +0.1 +0.1 -0.2 N.D.
carbon source Disodium Glutarate (C) +3.1 +0.1 +0.1 -0.1 N.D.
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ABZR87_RS09715
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