Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS09615 and ABZR87_RS09620 are separated by 104 nucleotidesABZR87_RS09620 and ABZR87_RS09625 are separated by 107 nucleotidesABZR87_RS09625 and ABZR87_RS09630 are separated by 36 nucleotidesABZR87_RS09630 and ABZR87_RS09635 are separated by 30 nucleotides ABZR87_RS09615: ABZR87_RS09615 - 50S ribosomal protein L19, at 2,039,793 to 2,040,179 _RS09615 ABZR87_RS09620: ABZR87_RS09620 - CoA pyrophosphatase, at 2,040,284 to 2,040,988 _RS09620 ABZR87_RS09625: ABZR87_RS09625 - CobD/CbiB family protein, at 2,041,096 to 2,042,037 _RS09625 ABZR87_RS09630: ABZR87_RS09630 - hypothetical protein, at 2,042,074 to 2,042,388 _RS09630 ABZR87_RS09635: ABZR87_RS09635 - ribosome small subunit-dependent GTPase A, at 2,042,419 to 2,043,366 _RS09635
Group Condition ABZR87_RS09615 ABZR87_RS09620 ABZR87_RS09625 ABZR87_RS09630 ABZR87_RS09635
carbon source Dodecandioic (C) -3.8 -0.1 -2.4 -0.4 -4.1
carbon source 4-Hydroxybenzoic Acid (C) -4.5 -0.5 -1.2 -0.2 -3.1
carbon source Sebacic (C) -3.5 -0.8 -2.9 -0.5 -1.7
carbon source Dodecandioic (C) -2.5 -0.1 -2.8 +0.1 -3.1
carbon source Azelaic (C) -2.8 -0.1 -1.3 -0.4 -3.4
carbon source Heptanoic (C) -3.1 -0.2 -0.6 +0.1 -3.6
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -2.4 -0.5 -3.5 -0.2 -0.1
micoeukaryotes Dictyostellum sp.mixed culture-1 -4.2 +0.2 +0.2 -0.2 -2.6
carbon source Heptanoic (C) -2.8 -0.3 -0.3 +0.2 -3.3
nitrogen source nitrogen source nitrite 1mM -1.8 -0.2 -0.1 -0.3 -3.8
carbon source Sebacic (C) -0.1 -0.4 -1.6 -0.0 -3.6
soil soil sample 8; outgrowth in LB -3.0 +0.0 -1.9 -0.3 -0.7
carbon source propionate (C) -1.5 -0.3 -1.3 -0.0 -2.7
soil soil sample 6; outgrowth in LB -2.8 -0.3 -1.8 +0.0 -0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.9 -0.4 -1.4 -0.2 -0.7
carbon source D-Xylose (C) -3.1 +0.0 -0.7 -0.0 -1.6
no_plant_soil no_plant_soil sample 2; outgrowth in LB -2.9 +0.0 -1.5 -0.2 -0.8
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -2.7 -0.2 -2.0 -0.0 -0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.8 +0.6 -1.5 -0.5 -1.8
nitrogen source nitrogen source nitrate 20mM -4.3 +0.1 -0.7 -0.1 -0.1
soil soil sample 5; outgrowth in LB -2.7 +0.1 -2.1 +0.4 -0.5
carbon source Octanoic (C) -1.9 -0.6 +0.6 -0.2 -2.5
soil soil sample 7; outgrowth in LB -2.9 +0.1 -1.3 +0.2 -0.6
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.4 +0.3 +0.0 +0.1 -2.5
carbon source Lauric (C) +0.1 +0.2 -2.8 +0.1 -1.9
soil soil EcoFAB sample 1; outgrowth in LB -2.1 +0.6 -2.0 -0.6 +0.2
carbon source Octanoic (C) -2.1 -0.3 +1.1 +0.4 -2.7
rhizosphere rhizosphere sample 7; outgrowth in LB -0.5 +0.2 -1.5 -0.7 +2.3
root root sample 6; outgrowth in LB +2.0 +0.0 -2.5 -0.8 +2.7
root root sample 4; outgrowth in LB +1.3 +0.3 -1.0 +0.4 +2.2
remove
ABZR87_RS09615
plot		 remove
ABZR87_RS09620
plot		 remove
ABZR87_RS09625		 remove
ABZR87_RS09630
plot		 remove
ABZR87_RS09635
plot