Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS09130 and ABZR87_RS09135 are separated by 180 nucleotidesABZR87_RS09135 and ABZR87_RS09140 are separated by 15 nucleotidesABZR87_RS09140 and ABZR87_RS09145 are separated by 4 nucleotidesABZR87_RS09145 and ABZR87_RS09150 are separated by 192 nucleotides ABZR87_RS09130: ABZR87_RS09130 - flavin reductase family protein, at 1,932,419 to 1,932,997 _RS09130 ABZR87_RS09135: ABZR87_RS09135 - peptide-methionine (S)-S-oxide reductase MsrA, at 1,933,178 to 1,933,738 _RS09135 ABZR87_RS09140: ABZR87_RS09140 - DUF72 domain-containing protein, at 1,933,754 to 1,934,839 _RS09140 ABZR87_RS09145: ABZR87_RS09145 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 1,934,844 to 1,936,064 _RS09145 ABZR87_RS09150: ABZR87_RS09150 - pyridoxamine 5'-phosphate oxidase, at 1,936,257 to 1,936,895 _RS09150
Group Condition ABZR87_RS09130 ABZR87_RS09135 ABZR87_RS09140 ABZR87_RS09145 ABZR87_RS09150
carbon source Octanoic (C) -1.7 -0.5 -0.2 -1.1 N.D.
carbon source Octanoic (C) -1.2 +0.2 -0.3 -1.7 N.D.
carbon source Heptanoic (C) -1.1 +0.3 -0.2 -1.4 N.D.
carbon source Heptanoic (C) -0.8 -0.0 +0.0 -1.6 N.D.
soil soil EcoFAB sample 1; outgrowth in LB -0.2 -0.4 -0.3 -1.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.4 -0.6 +0.3 -0.7 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.7 -0.3 +0.2 -0.5 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.0 -0.1 -0.3 -0.6 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -0.3 -0.4 +0.3 N.D.
root root EcoFAB sample 2; outgrowth in LB -0.4 -0.5 +0.3 +0.1 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.2 +0.0 +0.2 -0.7 N.D.
carbon source butyrate (C) -0.4 +0.2 +0.2 -0.3 N.D.
carbon source Azelaic (C) -0.4 +0.5 +0.2 -0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -0.4 +0.1 +0.5 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.3 +0.3 -0.2 -0.3 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB -0.1 -0.2 -0.2 +0.6 N.D.
carbon source Disodium Glutarate (C) +0.3 -0.1 +0.4 -0.5 N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.7 -0.1 +0.2 -0.5 N.D.
carbon source Disodium Glutarate (C) +0.5 +0.2 +0.1 -0.4 N.D.
carbon source Sebacic (C) +0.1 +0.5 +0.1 -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 -0.3 +0.8 +0.1 N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB +0.5 -0.3 +0.2 +0.3 N.D.
root root sample 6; outgrowth in LB +0.6 -0.9 +0.4 +0.7 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 -0.2 +0.4 -0.0 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB +0.6 +0.1 +0.2 -0.1 N.D.
carbon source Dodecandioic (C) +0.4 +0.4 +0.2 -0.1 N.D.
rhizosphere rhizosphere sample 6; outgrowth in LB +0.7 -0.1 -0.2 +0.6 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB -0.1 +0.0 +0.5 +0.5 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.0 +0.0 +0.1 +0.0 N.D.
root root sample 5; outgrowth in LB +1.4 -0.1 +0.3 +0.1 N.D.
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