Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS08990 and ABZR87_RS08995 are separated by 68 nucleotidesABZR87_RS08995 and ABZR87_RS09000 are separated by 162 nucleotidesABZR87_RS09000 and ABZR87_RS09005 are separated by 6 nucleotidesABZR87_RS09005 and ABZR87_RS09010 are separated by 53 nucleotides ABZR87_RS08990: ABZR87_RS08990 - peptidoglycan-associated lipoprotein Pal, at 1,907,679 to 1,908,200 _RS08990 ABZR87_RS08995: ABZR87_RS08995 - tol-pal system protein YbgF, at 1,908,269 to 1,909,054 _RS08995 ABZR87_RS09000: ABZR87_RS09000 - 7-cyano-7-deazaguanine synthase QueC, at 1,909,217 to 1,909,891 _RS09000 ABZR87_RS09005: ABZR87_RS09005 - YeeE/YedE family protein, at 1,909,898 to 1,911,013 _RS09005 ABZR87_RS09010: ABZR87_RS09010 - tRNA-Lys, at 1,911,067 to 1,911,142 _RS09010
Group Condition ABZR87_RS08990 ABZR87_RS08995 ABZR87_RS09000 ABZR87_RS09005 ABZR87_RS09010
soil soil EcoFAB sample 1; outgrowth in LB -5.1 -0.8 -1.2 +0.0 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -3.2 -0.7 -1.8 -0.3 N.D.
no_plant_soil no_plant_soil sample 2; outgrowth in LB -4.2 -0.4 -1.1 -0.0 N.D.
soil soil sample 4; outgrowth in LB -3.5 -0.5 -1.7 -0.0 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -3.6 -0.5 -1.2 -0.2 N.D.
soil soil sample 6; outgrowth in LB -3.9 -0.2 -1.1 -0.1 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB -2.9 -0.7 -1.5 -0.2 N.D.
rhizosphere rhizosphere sample 6; outgrowth in LB -3.8 -0.8 -0.7 -0.1 N.D.
soil soil sample 3; outgrowth in LB -3.9 -0.4 -1.2 +0.3 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -3.7 -0.6 -1.0 +0.1 N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB -3.4 -0.2 -1.1 -0.3 N.D.
soil soil sample 8; outgrowth in LB -3.6 -0.0 -1.2 -0.1 N.D.
rhizosphere rhizosphere sample 8; outgrowth in LB -3.3 -0.5 -1.0 -0.1 N.D.
soil soil sample 1; outgrowth in LB -3.4 -0.3 -1.4 +0.2 N.D.
soil soil sample 2; outgrowth in LB -2.7 -0.6 -1.5 -0.1 N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -2.8 -0.9 -1.1 +0.0 N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -3.9 -0.2 -0.6 -0.0 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -3.2 -0.5 -0.9 -0.1 N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB -3.6 -0.2 -0.9 +0.0 N.D.
soil soil EcoFAB sample 2; outgrowth in LB -4.0 -0.4 -0.2 -0.0 N.D.
root root EcoFAB sample 2; outgrowth in LB -2.7 -1.0 -0.7 -0.2 N.D.
root root EcoFAB sample 1; outgrowth in LB -3.4 -0.6 -0.4 -0.2 N.D.
rhizosphere rhizosphere sample 5; outgrowth in LB -2.8 -0.6 -1.1 +0.0 N.D.
soil soil sample 5; outgrowth in LB -3.0 -0.3 -1.1 -0.0 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -2.5 -0.7 -1.2 +0.1 N.D.
root root sample 6; outgrowth in LB -2.7 -0.6 -1.3 +0.5 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB -2.7 -0.4 -1.2 +0.1 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB -2.9 -0.2 -1.0 +0.2 N.D.
carbon source Octanoic (C) +1.9 +0.8 -1.8 -0.2 N.D.
carbon source Octanoic (C) +2.0 +0.8 -1.8 -0.2 N.D.
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ABZR87_RS08990
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ABZR87_RS08995
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