Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS08930	ABZR87_RS08935	ABZR87_RS08940	ABZR87_RS08945	ABZR87_RS08950
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	-0.6	-0.7	-0.6	-0.6	-0.6
root	root sample 6; outgrowth in LB	-0.3	-0.3	-0.3	-0.2	-1.8
carbon source	Octanoic (C)	+0.1	+0.2	-0.2	+0.2	-2.7
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	-0.3	-0.2	-0.4	-0.4	-1.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.0	-0.4	-0.1	+0.1	-1.2
carbon source	Octanoic (C)	+0.1	+0.2	-0.3	+0.3	-1.9
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-0.9	-0.2	+0.0	-0.4
carbon source	Sebacic (C)	-0.1	+0.2	-0.1	+0.5	-1.9
carbon source	Dodecandioic (C)	+0.1	-0.1	+0.0	+0.2	-1.5
carbon source	Protocatechuic Acid (C)	+0.0	-0.1	+0.1	+0.2	-1.5
carbon source	Dodecandioic (C)	+0.0	+0.1	+0.1	-0.1	-1.4
carbon source	4-Hydroxybenzoic Acid (C)	+0.1	+0.1	-0.1	-0.3	-1.0
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	+0.1	+0.1	+0.1	+0.1	-1.6
root	root sample 5; outgrowth in LB	-0.5	-0.1	-0.4	-0.5	+0.5
root	root EcoFAB sample 1; outgrowth in LB	+0.0	+0.2	-0.1	+0.2	-1.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	+0.3	-0.0	-0.1	-1.1
root	root EcoFAB sample 2; outgrowth in LB	+0.2	+0.4	+0.1	+0.4	-1.8
rhizosphere	rhizosphere sample 9; outgrowth in LB	+0.1	+0.4	+0.1	+0.3	-1.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.0	+1.0	+0.0	+0.3	-0.2
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	+0.4	+0.5	+0.4	+0.3	-0.4
phage	Ra3_0.01	+0.5	+0.3	+0.5	+0.5	-0.0
soil	soil EcoFAB sample 2; outgrowth in LB	+0.9	+1.1	+1.1	+0.9	-2.1
soil	soil EcoFAB sample 1; outgrowth in LB	+0.7	+1.3	+0.8	+0.8	-0.2
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	+1.5	+1.5	+1.4	+1.3	-1.2
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	+1.2	+1.1	+1.3	+1.2	+0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	+1.9	+1.8	+1.9	+1.7	-0.9
phage	Ra1_0.01	+2.1	+1.9	+2.2	+2.0	+1.0
phage	Ra3_0.1	+2.5	+2.4	+2.6	+2.4	+0.8
phage	Ra1_0.1	+6.1	+6.0	+6.2	+6.1	+2.4
phage	Ra3_1	+6.1	+6.0	+6.2	+6.1	+2.5