Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABZR87_RS08925	ABZR87_RS08930	ABZR87_RS08935	ABZR87_RS08940	ABZR87_RS08945
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	-0.5	-0.6	-0.7	-0.6	-0.6
root	root sample 6; outgrowth in LB	-0.4	-0.3	-0.3	-0.3	-0.2
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	-0.1	-0.3	-0.2	-0.4	-0.4
root	root sample 5; outgrowth in LB	+0.4	-0.5	-0.1	-0.4	-0.5
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.1	+0.1	-0.9	-0.2	+0.0
micoeukaryotes	Dictyostellum sp.mixed culture-2	-0.3	-0.0	-0.3	-0.2	-0.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.3	-0.1	-0.2	-0.1	-0.1
soil	soil sample 6; outgrowth in LB	-0.1	-0.2	-0.1	-0.2	-0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.3	+0.0	-0.4	-0.1	+0.1
rhizosphere	rhizosphere sample 6; outgrowth in LB	+0.2	-0.1	-0.4	-0.0	-0.3
nitrogen source	nitrogen source nitrite 0.5mM	+0.2	-0.0	-0.3	+0.2	-0.2
carbon source	Octanoic (C)	+0.0	+0.1	+0.2	-0.3	+0.3
carbon source	Sebacic (C)	-0.0	-0.1	+0.2	-0.1	+0.5
carbon source	Azelaic (C)	-0.1	+0.0	+0.4	+0.2	+0.2
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	+0.4	+0.3	-0.3	+0.3	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	-0.0	+1.0	+0.0	+0.3
rhizosphere	rhizosphere sample 9; outgrowth in LB	+0.2	+0.1	+0.4	+0.1	+0.3
rhizosphere	rhizosphere sample 3; outgrowth in LB	+0.3	+0.2	+0.4	+0.2	+0.3
root	root EcoFAB sample 2; outgrowth in LB	+0.4	+0.2	+0.4	+0.1	+0.4
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	+0.5	+0.4	+0.5	+0.4	+0.3
phage	Ra3_0.01	+0.5	+0.5	+0.3	+0.5	+0.5
soil	soil EcoFAB sample 1; outgrowth in LB	+0.8	+0.7	+1.3	+0.8	+0.8
soil	soil EcoFAB sample 2; outgrowth in LB	+0.8	+0.9	+1.1	+1.1	+0.9
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	+1.2	+1.2	+1.1	+1.3	+1.2
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	+1.4	+1.5	+1.5	+1.4	+1.3
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	+2.0	+1.9	+1.8	+1.9	+1.7
phage	Ra1_0.01	+2.1	+2.1	+1.9	+2.2	+2.0
phage	Ra3_0.1	+2.5	+2.5	+2.4	+2.6	+2.4
phage	Ra3_1	+6.1	+6.1	+6.0	+6.2	+6.1
phage	Ra1_0.1	+6.2	+6.1	+6.0	+6.2	+6.1