Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS08915	ABZR87_RS08920	ABZR87_RS08925	ABZR87_RS08930	ABZR87_RS08935
root	root sample 4; outgrowth in LB	-2.9	-0.0	+0.2	-0.1	-0.0
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	-0.2	-0.5	-0.5	-0.6	-0.7
root	root sample 6; outgrowth in LB	-1.0	-0.2	-0.4	-0.3	-0.3
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.3	-0.2	-0.1	+0.1	-0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.7	-0.0	-0.3	+0.0	-0.4
root	root sample 5; outgrowth in LB	-0.4	-0.4	+0.4	-0.5	-0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.8	+0.1	-0.2	+0.1	-0.2
carbon source	Azelaic (C)	-1.0	+0.0	-0.1	+0.0	+0.4
rhizosphere	rhizosphere sample 3; outgrowth in LB	-1.4	-0.0	+0.3	+0.2	+0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.6	+0.2	+0.1	+0.1	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.6	+0.0	-0.2	-0.0	+1.0
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-0.6	+0.4	+0.4	+0.3	-0.3
carbon source	Disodium Glutarate (C)	+0.8	-0.2	-0.2	+0.1	-0.1
nitrogen source	nitrogen source nitrite 0.5mM	+0.6	+0.1	+0.2	-0.0	-0.3
soil	soil sample 6; outgrowth in LB	+1.2	-0.1	-0.1	-0.2	-0.1
phage	Ra3_0.01	-0.3	+0.4	+0.5	+0.5	+0.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	+1.4	+0.1	+0.1	-0.0	+0.1
root	root EcoFAB sample 2; outgrowth in LB	+0.6	+0.3	+0.4	+0.2	+0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+2.1	+0.1	-0.0	+0.1	-0.3
soil	soil EcoFAB sample 1; outgrowth in LB	-0.9	+0.6	+0.8	+0.7	+1.3
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	+0.6	+0.4	+0.5	+0.4	+0.5
rhizosphere	rhizosphere sample 9; outgrowth in LB	+1.8	+0.1	+0.2	+0.1	+0.4
soil	soil EcoFAB sample 2; outgrowth in LB	+0.6	+0.8	+0.8	+0.9	+1.1
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	+0.2	+1.3	+1.2	+1.2	+1.1
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	+0.3	+1.4	+1.4	+1.5	+1.5
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	+0.6	+1.8	+2.0	+1.9	+1.8
phage	Ra1_0.01	+0.1	+2.1	+2.1	+2.1	+1.9
phage	Ra3_0.1	-0.0	+2.4	+2.5	+2.5	+2.4
phage	Ra3_1	+0.1	+6.1	+6.1	+6.1	+6.0
phage	Ra1_0.1	+0.4	+6.2	+6.2	+6.1	+6.0