Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS08705	ABZR87_RS08710	ABZR87_RS08715	ABZR87_RS08720	ABZR87_RS08725
carbon source	Octanoic (C)	-2.8	-4.5	-3.4	-2.3	-2.1
carbon source	Octanoic (C)	-2.4	-2.6	-3.2	-2.2	-1.9
soil	soil sample 6; outgrowth in LB	-1.9	-2.6	-2.2	-2.9	-1.8
nitrogen source	nitrogen source nitrite 5mM	-1.6	-1.7	-1.5	-1.2	-1.8
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.6	-2.1	-1.1	-1.2	-1.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.2	-1.7	-1.3	-1.7	-1.3
soil	soil sample 8; outgrowth in LB	-1.1	-1.6	-1.3	-1.8	-1.1
root	root sample 6; outgrowth in LB	-1.1	-1.6	-1.6	-1.3	-0.8
soil	soil sample 7; outgrowth in LB	-0.9	-1.5	-1.4	-1.5	-1.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.8	-1.4	-0.7	-1.7	-1.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.0	-1.6	-0.9	-1.0	-1.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.2	-1.6	-1.0	-1.0	-0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.0	-1.5	-0.9	-1.0	-1.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.9	-1.6	-0.7	-1.0	-1.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.9	-1.3	-0.7	-1.3	-0.9
micoeukaryotes	Acanthamoeba sp., muxed culture-1	+1.0	+1.2	+0.9	+0.4	+1.6
micoeukaryotes	C.elegans, mixed culture-2	+1.2	+1.3	+0.8	+0.4	+1.7
rhizosphere	rhizosphere sample 3; outgrowth in LB	+1.2	+0.9	+1.0	+1.4	+1.2
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	+1.3	+0.9	+1.5	+0.8	+1.5
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	+1.4	+0.8	+1.0	+1.1	+1.6
carbon source	4-Hydroxybenzoic Acid (C)	+0.6	+1.0	+2.7	+0.5	+1.3
micoeukaryotes	Dictyostellum sp.mixed culture-2	+1.5	+1.9	+1.0	+0.6	+2.1
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	+1.8	+1.2	+1.6	+1.3	+1.8
soil	soil EcoFAB sample 1; outgrowth in LB	+1.9	+1.2	+2.1	+1.7	+1.9
phage	Ra1_0.01	+2.3	+2.3	+2.2	+2.4	+2.4
phage	Ra3_0.1	+2.5	+2.4	+2.3	+2.4	+2.5
soil	soil EcoFAB sample 2; outgrowth in LB	+3.2	+2.5	+2.9	+3.0	+3.1
root	root EcoFAB sample 2; outgrowth in LB	+3.7	+2.7	+3.2	+3.1	+3.5
phage	Ra3_1	+6.1	+6.1	+5.7	+5.8	+6.1
phage	Ra1_0.1	+6.2	+6.2	+5.8	+6.0	+6.4