Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS08600	ABZR87_RS08605	ABZR87_RS08610	ABZR87_RS08615	ABZR87_RS08620
soil	soil EcoFAB sample 1; outgrowth in LB	+0.2	-0.7	-2.5	N.D.	-2.2
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	-2.2	-0.1	-0.6	N.D.	+0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	-0.0	-0.2	-1.6	N.D.	-1.0
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.1	-0.1	-1.7	N.D.	-0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.0	-0.4	-1.0	N.D.	-1.0
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	+0.0	-0.2	-1.4	N.D.	-0.6
root	root sample 6; outgrowth in LB	+0.1	-0.1	-1.8	N.D.	-0.3
root	root EcoFAB sample 2; outgrowth in LB	-0.1	-0.2	-1.4	N.D.	-0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-0.3	-0.7	N.D.	-1.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.1	+0.0	-1.1	N.D.	-0.9
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.0	-0.0	-1.3	N.D.	-0.6
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	-0.2	-0.2	-0.4	N.D.	-1.1
rhizosphere	rhizosphere sample 5; outgrowth in LB	+0.1	-0.2	-1.2	N.D.	-0.4
rhizosphere	rhizosphere sample 9; outgrowth in LB	-0.0	-0.6	-1.1	N.D.	+0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	-0.0	-0.0	-1.2	N.D.	-0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	+0.0	+0.0	N.D.	-1.7
soil	soil sample 6; outgrowth in LB	-0.1	-0.1	-0.9	N.D.	-0.5
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.1	-0.3	-0.1	N.D.	-1.1
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	+0.0	-0.2	-0.6	N.D.	-0.7
root	root sample 4; outgrowth in LB	+0.1	-0.2	-0.6	N.D.	-0.8
soil	soil sample 1; outgrowth in LB	-0.1	-0.1	-0.8	N.D.	-0.5
rhizosphere	rhizosphere sample 4; outgrowth in LB	+0.2	-0.1	-0.5	N.D.	-1.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.0	+0.0	-0.7	N.D.	-0.7
carbon source	Pimelic (C)	+0.0	+0.0	-0.7	N.D.	-0.6
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	-0.0	+0.1	-0.6	N.D.	-0.7
nitrogen source	nitrogen source nitrate 5mM	-0.0	+0.1	-0.3	N.D.	-1.0
root	root EcoFAB sample 1; outgrowth in LB	+0.1	+0.0	-0.9	N.D.	-0.3
soil	soil EcoFAB sample 2; outgrowth in LB	-0.0	+0.2	-1.2	N.D.	+0.3
carbon source	Sebacic (C)	-0.1	+0.0	-1.0	N.D.	+0.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.0	+0.2	-0.6	N.D.	+0.8