Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS08435 and ABZR87_RS08440 are separated by 45 nucleotidesABZR87_RS08440 and ABZR87_RS08445 are separated by 1165 nucleotidesABZR87_RS08445 and ABZR87_RS08450 are separated by 101 nucleotidesABZR87_RS08450 and ABZR87_RS08455 are separated by 257 nucleotides ABZR87_RS08435: ABZR87_RS08435 - AI-2E family transporter, at 1,791,049 to 1,792,101 _RS08435 ABZR87_RS08440: ABZR87_RS08440 - hypothetical protein, at 1,792,147 to 1,792,668 _RS08440 ABZR87_RS08445: ABZR87_RS08445 - co-chaperone GroES, at 1,793,834 to 1,794,124 _RS08445 ABZR87_RS08450: ABZR87_RS08450 - chaperonin GroEL, at 1,794,226 to 1,795,869 _RS08450 ABZR87_RS08455: ABZR87_RS08455 - YjgN family protein, at 1,796,127 to 1,797,209 _RS08455
Group Condition ABZR87_RS08435 ABZR87_RS08440 ABZR87_RS08445 ABZR87_RS08450 ABZR87_RS08455
carbon source Sebacic (C) -0.1 -1.6 N.D. N.D. +0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -1.1 N.D. N.D. -0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -1.2 N.D. N.D. -0.1
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.1 -1.1 N.D. N.D. -0.1
rhizosphere rhizosphere sample 8; outgrowth in LB -0.1 -0.8 N.D. N.D. -0.1
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.1 -0.6 N.D. N.D. -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.6 N.D. N.D. -0.0
root root sample 6; outgrowth in LB +0.1 -1.2 N.D. N.D. +0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.6 N.D. N.D. +0.1
carbon source Protocatechuic Acid (C) -0.1 -0.4 N.D. N.D. -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -0.3 N.D. N.D. +0.2
rhizosphere rhizosphere sample 6; outgrowth in LB +0.1 -0.7 N.D. N.D. +0.0
carbon source Octanoic (C) +0.2 -0.4 N.D. N.D. -0.3
soil soil sample 1; outgrowth in LB +0.1 -0.7 N.D. N.D. +0.2
nitrogen source nitrogen source nitrite 1mM +0.1 -0.6 N.D. N.D. +0.1
nitrogen source nitrogen source nitrite 5mM -0.2 +0.4 N.D. N.D. -0.1
nitrogen source nitrogen source Ammonium chloride 20mM -0.2 +0.6 N.D. N.D. -0.0
soil soil EcoFAB sample 1; outgrowth in LB -0.3 +0.6 N.D. N.D. +0.2
carbon source Azelaic (C) +0.2 +0.4 N.D. N.D. -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 +0.6 N.D. N.D. +0.2
carbon source D-Xylose (C) -0.1 +0.7 N.D. N.D. +0.1
carbon source succinate (C) -0.1 +0.6 N.D. N.D. +0.1
nitrogen source nitrogen source nitrite 0.5mM -0.2 +0.9 N.D. N.D. -0.0
nitrogen source nitrogen source nitrate 5mM +0.1 +0.5 N.D. N.D. +0.1
root root sample 4; outgrowth in LB +0.1 +0.6 N.D. N.D. +0.0
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.1 +0.6 N.D. N.D. +0.3
root root sample 5; outgrowth in LB +0.1 +0.4 N.D. N.D. +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.6 N.D. N.D. +0.1
rhizosphere rhizosphere sample 2; outgrowth in LB +0.3 +0.6 N.D. N.D. +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +1.8 N.D. N.D. -0.2
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