Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS08140 and ABZR87_RS08145 are separated by 8 nucleotidesABZR87_RS08145 and ABZR87_RS08150 are separated by 170 nucleotidesABZR87_RS08150 and ABZR87_RS08155 are separated by 162 nucleotidesABZR87_RS08155 and ABZR87_RS08160 are separated by 323 nucleotides ABZR87_RS08140: ABZR87_RS08140 - DUF1045 domain-containing protein, at 1,728,929 to 1,729,717 _RS08140 ABZR87_RS08145: ABZR87_RS08145 - alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase, at 1,729,726 to 1,730,901 _RS08145 ABZR87_RS08150: ABZR87_RS08150 - EAL domain-containing protein, at 1,731,072 to 1,733,795 _RS08150 ABZR87_RS08155: ABZR87_RS08155 - methyl-accepting chemotaxis protein, at 1,733,958 to 1,735,370 _RS08155 ABZR87_RS08160: ABZR87_RS08160 - MFS transporter, at 1,735,694 to 1,737,016 _RS08160
Group Condition ABZR87_RS08140 ABZR87_RS08145 ABZR87_RS08150 ABZR87_RS08155 ABZR87_RS08160
root root sample 5; outgrowth in LB -0.2 -0.1 +0.4 -1.9 +0.0
carbon source Octanoic (C) -0.0 -0.7 -0.0 -0.7 +0.4
carbon source Octanoic (C) -0.1 -0.1 +0.2 -0.8 -0.2
rhizosphere rhizosphere sample 9; outgrowth in LB -0.2 +0.1 +0.3 -1.1 +0.1
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.1 +0.3 +0.1 -0.9 +0.3
soil soil sample 4; outgrowth in LB +0.3 +0.1 +0.1 -0.8 -0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.2 +0.1 -0.7 -0.9
phage Ra3_1 +0.1 +0.4 -0.3 -0.4 +0.0
soil soil sample 9; outgrowth in LB +0.1 +0.1 +0.2 -0.7 +0.3
soil soil EcoFAB sample 1; outgrowth in LB +0.3 +0.3 -0.0 -0.8 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.4 +0.2 +0.1 -0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.9 +0.3 -0.6 -0.8
root root sample 6; outgrowth in LB -0.3 +0.2 -0.4 -0.0 +0.6
phage Ra1_0.1 +0.2 +0.5 -0.4 +0.2 -0.2
root root sample 4; outgrowth in LB +0.2 +0.3 +0.4 -0.7 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.4 +0.4 -0.3 -0.4
rhizosphere rhizosphere sample 8; outgrowth in LB -0.2 +0.3 +0.1 -0.5 +0.7
rhizosphere rhizosphere sample 3; outgrowth in LB +0.1 +0.6 +0.3 -0.4 -0.1
carbon source Protocatechuic Acid (C) -0.3 +0.2 -0.1 +0.2 +0.8
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.8 +0.3 -0.4 +0.3
carbon source Sebacic (C) -0.3 +0.6 -0.2 +0.7 +0.0
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.1 +1.1 -0.0 +0.0 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 +0.4 -0.1 +0.1 +0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 +0.4 +0.1 -0.2 +1.0
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.1 +0.4 +0.2 -0.6 +1.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +0.9 -0.1 +0.1 +0.0
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +0.3 +1.2 +0.1 -0.2 +0.2
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.2 +1.0 -0.1 +0.6 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +1.1 +0.8 -0.2 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +1.2 +0.4 -0.3 +0.1
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ABZR87_RS08145
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