Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS07995	ABZR87_RS08000	ABZR87_RS08005	ABZR87_RS08010	ABZR87_RS08015
nitrogen source	nitrogen source nitrate 5mM	-0.0	-0.3	-0.1	-0.1	-3.1
nitrogen source	nitrogen source nitrate 20mM	+0.1	+0.0	-0.0	+0.1	-3.4
nitrogen source	nitrogen source nitrate 20mM	+0.1	-0.3	-0.0	+0.2	-3.1
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.3	-0.9	-0.3	-0.2	-2.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	-1.1	-0.2	+0.2	-1.1
nitrogen source	nitrogen source nitrate 5mM	+0.0	-0.1	-0.1	+0.1	-2.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.0	-0.8	-0.2	+0.2	-1.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.0	-0.6	-0.1	-0.1	-1.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-0.4	+0.0	-0.2	-1.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-1.0	-0.2	+0.0	-0.8
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-0.1	+0.2	-0.2	-0.2	-1.4
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	-0.1	-0.4	+0.2	+0.1	-1.3
soil	soil sample 3; outgrowth in LB	-0.2	-0.5	+0.1	-0.0	-0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.4	-0.8	+0.0	+0.1	-1.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.3	-0.5	-0.1	-0.2	-0.8
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	-0.2	+0.2	+0.2	+0.1	-1.6
soil	soil sample 6; outgrowth in LB	-0.2	-0.6	+0.1	+0.1	-0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.3	-0.6	+0.1	+0.3	-1.2
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	-0.0	+0.5	+0.2	+0.1	-1.2
soil	soil EcoFAB sample 1; outgrowth in LB	-0.1	+1.2	-0.1	-0.0	-1.3
soil	soil EcoFAB sample 2; outgrowth in LB	-0.1	+1.4	-0.1	+0.0	-1.3
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.1	+1.4	+0.0	-0.2	-0.3
micoeukaryotes	C.elegans, mixed culture-2	+0.1	+1.2	+0.1	+0.1	-0.2
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	-0.1	+2.8	+0.1	+0.4	-0.9
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	-0.2	+3.5	+0.4	+0.1	-1.3
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	-0.2	+3.9	-0.0	+0.1	-1.3
phage	Ra1_0.01	+0.3	+2.0	+2.3	+0.0	-0.5
phage	Ra3_0.1	+0.2	+2.3	+2.6	+0.1	-0.5
phage	Ra3_1	+0.4	+5.9	+6.3	+0.0	-0.5
phage	Ra1_0.1	+0.5	+6.1	+6.5	-0.2	-0.5