Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS07990	ABZR87_RS07995	ABZR87_RS08000	ABZR87_RS08005	ABZR87_RS08010
carbon source	Lauric (C)	-0.4	+0.0	-0.7	-0.5	-0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.3	-0.2	-1.1	-0.2	+0.2
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.4	+0.3	-0.9	-0.3	-0.2
carbon source	Sebacic (C)	-0.8	-0.3	+0.0	-0.0	-0.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.1	+0.1	-1.0	-0.2	+0.0
nitrogen source	nitrogen source nitrite 0.5mM	+0.2	-0.1	-0.5	-0.3	-0.3
soil	soil sample 6; outgrowth in LB	-0.2	-0.2	-0.6	+0.1	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.0	-0.0	-0.8	-0.2	+0.2
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	+0.2	-0.1	-1.0	+0.1	+0.0
carbon source	Octanoic (C)	+0.2	+0.2	-0.5	-0.2	-0.4
carbon source	Dodecandioic (C)	-0.9	+0.2	-0.0	+0.0	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	+0.4	-0.8	+0.0	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.5	-0.2	-0.6	-0.0	+0.1
soil	soil sample 5; outgrowth in LB	+0.3	+0.0	-0.7	+0.4	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.0	+0.3	-0.6	+0.1	+0.3
soil	soil EcoFAB sample 1; outgrowth in LB	-0.3	-0.1	+1.2	-0.1	-0.0
carbon source	Octanoic (C)	+0.8	+0.3	-0.1	-0.3	-0.0
soil	soil EcoFAB sample 2; outgrowth in LB	-0.5	-0.1	+1.4	-0.1	+0.0
micoeukaryotes	Acanthamoeba sp., muxed culture-1	+0.0	+0.1	+0.8	+0.1	-0.3
micoeukaryotes	C.elegans, mixed culture-1	-0.1	+0.1	+1.0	+0.1	-0.1
micoeukaryotes	Dictyostellum sp.mixed culture-2	-0.0	+0.1	+1.4	+0.0	-0.2
micoeukaryotes	C.elegans, mixed culture-2	+0.0	+0.1	+1.2	+0.1	+0.1
micoeukaryotes	Dictyostellum sp.mixed culture-1	+0.4	+0.1	+1.1	+0.0	-0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	+0.1	-0.1	+2.8	+0.1	+0.4
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	-0.1	-0.2	+3.5	+0.4	+0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	-0.1	-0.2	+3.9	-0.0	+0.1
phage	Ra1_0.01	-0.2	+0.3	+2.0	+2.3	+0.0
phage	Ra3_0.1	+0.2	+0.2	+2.3	+2.6	+0.1
phage	Ra1_0.1	+0.1	+0.5	+6.1	+6.5	-0.2
phage	Ra3_1	+0.8	+0.4	+5.9	+6.3	+0.0