Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS07930 and ABZR87_RS07935 overlap by 4 nucleotidesABZR87_RS07935 and ABZR87_RS07940 are separated by 64 nucleotidesABZR87_RS07940 and ABZR87_RS07945 are separated by 2 nucleotidesABZR87_RS07945 and ABZR87_RS07950 are separated by 9 nucleotides ABZR87_RS07930: ABZR87_RS07930 - DUF485 domain-containing protein, at 1,686,071 to 1,686,379 _RS07930 ABZR87_RS07935: ABZR87_RS07935 - cation acetate symporter, at 1,686,376 to 1,688,106 _RS07935 ABZR87_RS07940: ABZR87_RS07940 - DUF294 nucleotidyltransferase-like domain-containing protein, at 1,688,171 to 1,689,997 _RS07940 ABZR87_RS07945: ABZR87_RS07945 - 3'-5' exonuclease, at 1,690,000 to 1,690,650 _RS07945 ABZR87_RS07950: ABZR87_RS07950 - sodium/substrate symporter small subunit, at 1,690,660 to 1,690,971 _RS07950
Group Condition ABZR87_RS07930 ABZR87_RS07935 ABZR87_RS07940 ABZR87_RS07945 ABZR87_RS07950
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.4 -0.4 -0.0 -0.2 -0.7
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.7 -0.4 -0.1 -0.2 -0.2
carbon source propionate (C) -0.2 -0.1 +0.1 -0.0 -1.2
carbon source Lauric (C) -0.1 -0.1 -0.1 -0.0 -1.1
carbon source propionate (C) -0.1 +0.0 +0.2 -0.0 -1.2
carbon source Disodium Glutarate (C) -0.4 +0.0 -0.1 -0.2 -0.3
carbon source acetate (C) -0.1 -0.2 +0.0 -0.0 -0.7
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.1 +0.2 -0.1 -0.2 -0.6
carbon source Sebacic (C) -0.7 +0.1 +0.1 -0.4 +0.2
carbon source Lauric (C) +0.0 +0.1 +0.0 -0.1 -0.8
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.2 -0.2 -0.2 -0.0
carbon source Trans-2-methyl-2-butenoic (C) -0.1 -0.1 -0.1 -0.4 +0.2
carbon source Dodecandioic (C) -0.2 -0.1 +0.2 -0.1 -0.2
carbon source Octanoic (C) +0.1 -0.3 +0.0 +0.2 -0.5
carbon source 4-Hydroxybenzoic Acid (C) +0.3 -0.2 +0.1 -0.3 -0.2
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -0.2 +0.3 -0.0 -0.2
soil soil sample 4; outgrowth in LB -0.2 +0.2 -0.2 -0.3 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.2 -0.2 -0.2 -0.2
rhizosphere rhizosphere sample 6; outgrowth in LB -0.1 +0.1 +0.2 -0.4 +0.1
root root sample 5; outgrowth in LB +0.5 +0.4 -0.3 -0.4 -0.4
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.3 -0.0 +0.1 -0.3 +0.4
rhizosphere rhizosphere sample 3; outgrowth in LB -0.6 +0.1 +0.3 +0.2 +0.0
soil soil EcoFAB sample 1; outgrowth in LB +0.0 +0.4 -0.1 +0.5 -0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 +0.3 +0.2 -0.4 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.1 -0.0 +0.4 -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 -0.0 +0.0 +0.1 -0.3
rhizosphere rhizosphere sample 4; outgrowth in LB +0.2 +0.2 +0.1 -0.3 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.3 -0.4 +0.3 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +0.0 -0.3 +0.5 -0.0
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.5 -0.1 +0.1 -0.2 +0.4
remove
ABZR87_RS07930
plot		 remove
ABZR87_RS07935
plot		 remove
ABZR87_RS07940		 remove
ABZR87_RS07945
plot		 remove
ABZR87_RS07950
plot