Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS07750 and ABZR87_RS07755 are separated by 176 nucleotidesABZR87_RS07755 and ABZR87_RS07760 are separated by 64 nucleotidesABZR87_RS07760 and ABZR87_RS07765 are separated by 162 nucleotidesABZR87_RS07765 and ABZR87_RS07770 are separated by 372 nucleotides ABZR87_RS07750: ABZR87_RS07750 - glycine--tRNA ligase subunit alpha, at 1,642,899 to 1,643,885 _RS07750 ABZR87_RS07755: ABZR87_RS07755 - apolipoprotein N-acyltransferase, at 1,644,062 to 1,645,573 _RS07755 ABZR87_RS07760: ABZR87_RS07760 - HlyC/CorC family transporter, at 1,645,638 to 1,646,531 _RS07760 ABZR87_RS07765: ABZR87_RS07765 - hypothetical protein, at 1,646,694 to 1,648,220 _RS07765 ABZR87_RS07770: ABZR87_RS07770 - rRNA maturation RNase YbeY, at 1,648,593 to 1,649,405 _RS07770
Group Condition ABZR87_RS07750 ABZR87_RS07755 ABZR87_RS07760 ABZR87_RS07765 ABZR87_RS07770
carbon source Sebacic (C) N.D. N.D. -5.0 +0.5 N.D.
carbon source Dodecandioic (C) N.D. N.D. -3.7 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -3.2 -0.2 N.D.
root root EcoFAB sample 2; outgrowth in LB N.D. N.D. -2.9 -0.4 N.D.
carbon source Azelaic (C) N.D. N.D. -2.9 -0.3 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB N.D. N.D. -2.7 -0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -2.2 -0.2 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -2.4 -0.0 N.D.
soil soil EcoFAB sample 2; outgrowth in LB N.D. N.D. -2.2 -0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -1.9 -0.3 N.D.
carbon source Octanoic (C) N.D. N.D. -1.7 -0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -2.1 +0.0 N.D.
root root EcoFAB sample 1; outgrowth in LB N.D. N.D. -2.2 +0.2 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB N.D. N.D. -2.2 +0.2 N.D.
carbon source Hexanoic (C) N.D. N.D. -1.9 -0.1 N.D.
soil soil EcoFAB sample 1; outgrowth in LB N.D. N.D. -2.1 +0.3 N.D.
carbon source Heptanoic (C) N.D. N.D. -1.2 -0.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -1.5 +0.1 N.D.
carbon source Dodecandioic (C) N.D. N.D. -1.6 +0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -1.8 +0.4 N.D.
carbon source Sebacic (C) N.D. N.D. -1.1 -0.3 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-1 N.D. N.D. -1.4 +0.1 N.D.
soil soil sample 4; outgrowth in LB N.D. N.D. -1.5 +0.3 N.D.
carbon source Hexanoic (C) N.D. N.D. -1.3 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -1.5 +0.4 N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB N.D. N.D. -1.2 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -2.2 +1.3 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB N.D. N.D. +0.3 -1.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -1.2 +0.7 N.D.
root root sample 6; outgrowth in LB N.D. N.D. +1.0 -0.5 N.D.
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