Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS07625 and ABZR87_RS07630 are separated by 99 nucleotidesABZR87_RS07630 and ABZR87_RS07635 are separated by 79 nucleotidesABZR87_RS07635 and ABZR87_RS07640 are separated by 83 nucleotidesABZR87_RS07640 and ABZR87_RS07645 are separated by 96 nucleotides ABZR87_RS07625: ABZR87_RS07625 - Holliday junction branch migration protein RuvA, at 1,615,615 to 1,616,196 _RS07625 ABZR87_RS07630: ABZR87_RS07630 - glycerophosphodiester phosphodiesterase, at 1,616,296 to 1,617,438 _RS07630 ABZR87_RS07635: ABZR87_RS07635 - crossover junction endodeoxyribonuclease RuvC, at 1,617,518 to 1,618,063 _RS07635 ABZR87_RS07640: ABZR87_RS07640 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 1,618,147 to 1,619,721 _RS07640 ABZR87_RS07645: ABZR87_RS07645 - Fis family transcriptional regulator, at 1,619,818 to 1,620,051 _RS07645
Group Condition ABZR87_RS07625 ABZR87_RS07630 ABZR87_RS07635 ABZR87_RS07640 ABZR87_RS07645
carbon source Protocatechuic Acid (C) -3.9 -0.1 -3.1 N.D. +0.0
nitrogen source nitrogen source Ammonium chloride 20mM -2.9 -0.1 -2.9 N.D. -1.1
carbon source Carbon source D-Glucose 10 mM -2.8 -0.0 -3.3 N.D. -0.9
nitrogen source nitrogen source nitrate 5mM -3.1 -0.2 -1.7 N.D. -1.5
carbon source Protocatechuic Acid (C) -3.9 +0.1 -2.7 N.D. -0.0
nitrogen source nitrogen source nitrate 20mM -2.5 -0.1 -3.2 N.D. -0.7
no_plant_soil no_plant_soil sample 3; outgrowth in LB -3.2 -0.1 -2.5 N.D. -0.4
carbon source Azelaic (C) -3.9 -0.0 -2.0 N.D. -0.2
nitrogen source nitrogen source nitrite 5mM -3.1 -0.2 -2.3 N.D. -0.4
nitrogen source nitrogen source nitrate 5mM -1.8 -0.1 -3.0 N.D. -0.9
carbon source Lauric (C) -2.8 -0.0 -3.1 N.D. +0.4
no_plant_soil no_plant_soil sample 2; outgrowth in LB -2.2 +0.0 -2.6 N.D. -0.6
carbon source Carbon source D-Glucose 10 mM -2.6 -0.0 -1.7 N.D. -1.0
no_plant_soil no_plant_soil sample 1; outgrowth in LB -2.6 -0.1 -2.6 N.D. +0.1
carbon source Dodecandioic (C) -3.3 +0.0 -2.2 N.D. +0.4
nitrogen source nitrogen source Ammonium chloride 20mM -1.2 -0.3 -2.8 N.D. -0.8
soil soil sample 7; outgrowth in LB -2.0 -0.1 -2.5 N.D. -0.3
soil soil sample 2; outgrowth in LB -2.4 -0.0 -2.3 N.D. -0.1
carbon source Pimelic (C) -1.0 +0.0 -2.3 N.D. -1.4
nitrogen source nitrogen source nitrite 5mM -2.0 -0.2 -1.8 N.D. -0.6
carbon source Pimelic (C) -1.6 -0.1 -1.8 N.D. -1.1
carbon source Heptanoic (C) -2.1 +0.1 -2.4 N.D. -0.1
carbon source Dodecandioic (C) -2.5 -0.0 -2.8 N.D. +1.0
carbon source Sebacic (C) -1.8 +0.0 -2.6 N.D. +0.3
soil soil sample 9; outgrowth in LB -2.7 -0.1 -1.5 N.D. +0.2
soil soil sample 6; outgrowth in LB -2.4 -0.0 -1.8 N.D. +0.3
carbon source Sebacic (C) -2.1 -0.4 -2.6 N.D. +1.3
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.4 +0.2 +1.5 N.D. -1.7
carbon source Octanoic (C) -1.6 +0.0 -1.7 N.D. +2.7
carbon source Octanoic (C) -1.1 +0.1 -2.1 N.D. +3.0
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ABZR87_RS07625
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