Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS07550 and ABZR87_RS07555 are separated by 4 nucleotidesABZR87_RS07555 and ABZR87_RS07565 are separated by 356 nucleotidesABZR87_RS07565 and ABZR87_RS07570 are separated by 700 nucleotidesABZR87_RS07570 and ABZR87_RS07575 are separated by 12 nucleotides ABZR87_RS07550: ABZR87_RS07550 - dihydroorotase, at 1,603,766 to 1,604,800 _RS07550 ABZR87_RS07555: ABZR87_RS07555 - DUF3025 domain-containing protein, at 1,604,805 to 1,605,605 _RS07555 ABZR87_RS07565: ABZR87_RS07565 - OsmC family protein, at 1,605,962 to 1,606,408 _RS07565 ABZR87_RS07570: ABZR87_RS07570 - 50S ribosomal protein L13, at 1,607,109 to 1,607,537 _RS07570 ABZR87_RS07575: ABZR87_RS07575 - 30S ribosomal protein S9, at 1,607,550 to 1,607,942 _RS07575
Group Condition ABZR87_RS07550 ABZR87_RS07555 ABZR87_RS07565 ABZR87_RS07570 ABZR87_RS07575
soil soil EcoFAB sample 1; outgrowth in LB N.D. -0.5 -0.7 N.D. N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB N.D. -0.7 -0.3 N.D. N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. -0.4 -0.6 N.D. N.D.
carbon source propionate (C) N.D. -0.2 -0.6 N.D. N.D.
carbon source Protocatechuic Acid (C) N.D. -0.3 -0.5 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.3 -0.5 N.D. N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.6 -0.2 N.D. N.D.
root root sample 6; outgrowth in LB N.D. -0.1 -0.7 N.D. N.D.
rhizosphere rhizosphere sample 6; outgrowth in LB N.D. -0.4 -0.3 N.D. N.D.
carbon source Beta-alanine (C) N.D. -0.0 -0.7 N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB N.D. -0.1 -0.5 N.D. N.D.
carbon source 1,2-Propanediol (C) N.D. +0.1 -0.7 N.D. N.D.
carbon source 3-Hydroxypropionate (C) N.D. +0.1 -0.7 N.D. N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB N.D. +0.1 -0.6 N.D. N.D.
carbon source Sebacic (C) N.D. -0.6 +0.1 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.5 +0.2 N.D. N.D.
carbon source Pimelic (C) N.D. +0.3 -0.5 N.D. N.D.
carbon source Beta-alanine (C) N.D. +0.4 -0.6 N.D. N.D.
carbon source Carbon source D-Glucose 10 mM N.D. +0.3 -0.5 N.D. N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB N.D. +0.3 -0.4 N.D. N.D.
carbon source butyrate (C) N.D. +0.3 -0.4 N.D. N.D.
soil soil sample 1; outgrowth in LB N.D. +0.3 -0.4 N.D. N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB N.D. -0.4 +0.3 N.D. N.D.
carbon source Pimelic (C) N.D. +0.6 -0.3 N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM N.D. +0.6 -0.1 N.D. N.D.
carbon source Sebacic (C) N.D. +0.2 +0.5 N.D. N.D.
carbon source Azelaic (C) N.D. +0.6 +0.3 N.D. N.D.
carbon source Dodecandioic (C) N.D. +0.6 +0.3 N.D. N.D.
soil soil EcoFAB sample 2; outgrowth in LB N.D. +0.9 +0.0 N.D. N.D.
root root EcoFAB sample 2; outgrowth in LB N.D. +1.0 +0.3 N.D. N.D.
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