Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS07530 and ABZR87_RS07535 overlap by 4 nucleotidesABZR87_RS07535 and ABZR87_RS07540 are separated by 76 nucleotidesABZR87_RS07540 and ABZR87_RS07545 are separated by 167 nucleotidesABZR87_RS07545 and ABZR87_RS07550 are separated by 33 nucleotides ABZR87_RS07530: ABZR87_RS07530 - glutamate/aspartate ABC transporter permease GltK, at 1,599,945 to 1,600,628 _RS07530 ABZR87_RS07535: ABZR87_RS07535 - amino acid ABC transporter ATP-binding protein, at 1,600,625 to 1,601,359 _RS07535 ABZR87_RS07540: ABZR87_RS07540 - class II glutamine amidotransferase, at 1,601,436 to 1,602,266 _RS07540 ABZR87_RS07545: ABZR87_RS07545 - glycerate kinase, at 1,602,434 to 1,603,732 _RS07545 ABZR87_RS07550: ABZR87_RS07550 - dihydroorotase, at 1,603,766 to 1,604,800 _RS07550
Group Condition ABZR87_RS07530 ABZR87_RS07535 ABZR87_RS07540 ABZR87_RS07545 ABZR87_RS07550
carbon source Octanoic (C) -1.5 -2.5 -0.5 -0.6 N.D.
carbon source Octanoic (C) -2.0 -1.6 -0.3 -0.3 N.D.
carbon source 1,2-Propanediol (C) -1.9 -1.6 +0.3 +0.0 N.D.
carbon source 3-Hydroxypropionate (C) -1.2 -1.5 +0.0 -0.0 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB -0.0 -1.3 -0.1 -0.5 N.D.
carbon source Sebacic (C) -0.9 -0.6 +0.1 -0.3 N.D.
soil soil sample 3; outgrowth in LB -0.4 -1.0 +0.1 -0.2 N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.2 -0.9 +0.1 -0.0 N.D.
carbon source Dodecandioic (C) -1.0 -0.2 +0.2 -0.0 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB -0.4 -0.5 -0.1 +0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.8 -0.1 +0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 -0.9 +0.2 +0.2 N.D.
root root sample 6; outgrowth in LB -0.2 -0.5 +0.7 -0.2 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB +0.1 -0.9 +0.2 +0.3 N.D.
carbon source Protocatechuic Acid (C) +0.5 -0.5 -0.1 -0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 -0.7 +0.2 +0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -0.1 +0.6 +0.1 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.2 +0.7 +0.1 -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.9 -0.3 +0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.8 -0.3 +0.3 N.D.
phage Ra1_0.1 +0.3 -0.1 -0.4 +0.6 N.D.
nitrogen source nitrogen source nitrite 5mM +0.7 +0.5 -0.3 -0.1 N.D.
phage Ra3_1 -0.1 +0.6 -0.1 +0.5 N.D.
micoeukaryotes C.elegans, mixed culture-2 +0.1 +1.0 +0.0 -0.2 N.D.
nitrogen source nitrogen source nitrite 5mM +0.4 +0.7 -0.3 +0.0 N.D.
carbon source Heptanoic (C) +0.8 +0.9 -0.4 -0.1 N.D.
carbon source Heptanoic (C) +0.8 +0.6 -0.2 -0.1 N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.6 +0.8 -0.0 +0.1 N.D.
carbon source Azelaic (C) +1.2 +0.9 -0.1 -0.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +1.4 +0.6 +0.1 +0.1 N.D.
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