Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS07065 and ABZR87_RS07070 are separated by 30 nucleotidesABZR87_RS07070 and ABZR87_RS07075 are separated by 59 nucleotidesABZR87_RS07075 and ABZR87_RS07080 are separated by 4 nucleotidesABZR87_RS07080 and ABZR87_RS07085 are separated by 15 nucleotides ABZR87_RS07065: ABZR87_RS07065 - LPS export ABC transporter ATP-binding protein, at 1,491,911 to 1,492,699 _RS07065 ABZR87_RS07070: ABZR87_RS07070 - lipopolysaccharide transport periplasmic protein LptA, at 1,492,730 to 1,493,317 _RS07070 ABZR87_RS07075: ABZR87_RS07075 - LPS export ABC transporter periplasmic protein LptC, at 1,493,377 to 1,494,009 _RS07075 ABZR87_RS07080: ABZR87_RS07080 - HAD family hydrolase, at 1,494,014 to 1,494,610 _RS07080 ABZR87_RS07085: ABZR87_RS07085 - KpsF/GutQ family sugar-phosphate isomerase, at 1,494,626 to 1,495,609 _RS07085
Group Condition ABZR87_RS07065 ABZR87_RS07070 ABZR87_RS07075 ABZR87_RS07080 ABZR87_RS07085
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. -0.7 N.D.
carbon source Sebacic (C) N.D. N.D. N.D. -0.7 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB N.D. N.D. N.D. -0.6 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. -0.6 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. -0.6 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. -0.5 N.D.
soil soil EcoFAB sample 1; outgrowth in LB N.D. N.D. N.D. -0.5 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. -0.5 N.D.
carbon source D-Glucose (C) N.D. N.D. N.D. -0.4 N.D.
root root sample 5; outgrowth in LB N.D. N.D. N.D. -0.4 N.D.
carbon source Dodecandioic (C) N.D. N.D. N.D. -0.3 N.D.
carbon source 3-Hydroxypropionate (C) N.D. N.D. N.D. -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. +0.3 N.D.
carbon source adipate (C) N.D. N.D. N.D. +0.3 N.D.
rhizosphere rhizosphere sample 5; outgrowth in LB N.D. N.D. N.D. +0.3 N.D.
root root EcoFAB sample 2; outgrowth in LB N.D. N.D. N.D. +0.3 N.D.
carbon source Valeric (C) N.D. N.D. N.D. +0.3 N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB N.D. N.D. N.D. +0.4 N.D.
carbon source butyrate (C) N.D. N.D. N.D. +0.4 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB N.D. N.D. N.D. +0.4 N.D.
carbon source D-Xylose (C) N.D. N.D. N.D. +0.4 N.D.
carbon source Pimelic (C) N.D. N.D. N.D. +0.4 N.D.
root root sample 6; outgrowth in LB N.D. N.D. N.D. +0.4 N.D.
soil soil EcoFAB sample 2; outgrowth in LB N.D. N.D. N.D. +0.5 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. +0.5 N.D.
carbon source Suberic (C) N.D. N.D. N.D. +0.6 N.D.
carbon source Octanoic (C) N.D. N.D. N.D. +0.8 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. N.D. +0.8 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. +1.3 N.D.
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