Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS07030	ABZR87_RS07035	ABZR87_RS07040	ABZR87_RS07045	ABZR87_RS07050
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	-0.0	-3.9	-0.3	N.D.	-4.2
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	-0.2	-3.9	-0.2	N.D.	-3.8
soil	soil sample 7; outgrowth in LB	-0.2	-3.3	-0.1	N.D.	-4.1
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	-0.1	-3.6	+0.1	N.D.	-4.1
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	+0.2	-3.9	+0.1	N.D.	-4.1
carbon source	Glycerol (C)	+0.0	-2.9	-0.0	N.D.	-4.7
soil	soil EcoFAB sample 1; outgrowth in LB	-0.6	-3.4	-0.9	N.D.	-2.6
soil	soil sample 5; outgrowth in LB	-0.1	-3.4	-0.2	N.D.	-3.7
soil	soil sample 8; outgrowth in LB	-0.0	-3.0	+0.1	N.D.	-4.2
soil	soil EcoFAB sample 2; outgrowth in LB	-0.1	-3.6	+0.2	N.D.	-3.7
nitrogen source	nitrogen source nitrate 5mM	+0.0	-1.2	-0.6	N.D.	-5.1
carbon source	4-Hydroxybenzoic Acid (C)	+0.8	-3.3	-0.8	N.D.	-3.0
soil	soil sample 1; outgrowth in LB	-0.0	-2.9	+0.1	N.D.	-3.5
carbon source	Trans-2-methyl-2-butenoic (C)	+0.1	-2.4	-0.4	N.D.	-3.6
soil	soil sample 2; outgrowth in LB	+0.1	-2.6	+0.0	N.D.	-3.8
carbon source	Trans-2-methyl-2-butenoic (C)	-0.2	-2.2	+0.5	N.D.	-4.3
carbon source	D-Glucose (C)	+0.1	-0.9	-0.4	N.D.	-4.6
soil	soil sample 3; outgrowth in LB	-0.1	-2.1	+0.0	N.D.	-3.6
nitrogen source	nitrogen source nitrite 0.5mM	+0.0	-1.1	+0.1	N.D.	-4.8
carbon source	butyrate (C)	+0.4	-2.5	-0.7	N.D.	-2.9
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	+0.1	-1.8	-0.3	N.D.	-3.7
carbon source	Glycerol (C)	+0.0	-2.5	-0.4	N.D.	-2.9
carbon source	D-Glucose (C)	+0.2	-1.2	-0.1	N.D.	-4.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.6	-2.9	-1.1	N.D.	-1.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.8	-2.7	-0.9	N.D.	-1.1
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	+0.2	-2.6	-0.3	N.D.	-2.8
soil	soil sample 9; outgrowth in LB	+0.2	-1.7	+0.0	N.D.	-3.6
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	+0.0	-2.3	+0.1	N.D.	-3.0
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	+0.3	-1.5	-0.3	N.D.	-3.4
carbon source	Azelaic (C)	+0.8	-1.4	-1.3	N.D.	-2.6