Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS07025 and ABZR87_RS07030 are separated by 30 nucleotidesABZR87_RS07030 and ABZR87_RS07035 are separated by 105 nucleotidesABZR87_RS07035 and ABZR87_RS07040 are separated by 94 nucleotidesABZR87_RS07040 and ABZR87_RS07045 are separated by 186 nucleotides ABZR87_RS07025: ABZR87_RS07025 - A/G-specific adenine glycosylase, at 1,484,595 to 1,485,743 _RS07025 ABZR87_RS07030: ABZR87_RS07030 - LON peptidase substrate-binding domain-containing protein, at 1,485,774 to 1,486,427 _RS07030 ABZR87_RS07035: ABZR87_RS07035 - RNase adapter RapZ, at 1,486,533 to 1,487,426 _RS07035 ABZR87_RS07040: ABZR87_RS07040 - PsiF family protein, at 1,487,521 to 1,487,862 _RS07040 ABZR87_RS07045: ABZR87_RS07045 - HPr(Ser) kinase/phosphatase, at 1,488,049 to 1,489,023 _RS07045
Group Condition ABZR87_RS07025 ABZR87_RS07030 ABZR87_RS07035 ABZR87_RS07040 ABZR87_RS07045
soil soil EcoFAB sample 1; outgrowth in LB -0.0 -0.6 -3.4 -0.9 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.6 -2.9 -1.1 N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.1 -0.0 -3.9 -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.8 -2.7 -0.9 N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.1 -0.2 -3.9 -0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.1 -2.8 -0.8 N.D.
soil soil sample 5; outgrowth in LB +0.0 -0.1 -3.4 -0.2 N.D.
soil soil sample 7; outgrowth in LB +0.0 -0.2 -3.3 -0.1 N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB +0.0 -0.1 -3.6 +0.1 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.2 +0.5 -2.3 -1.9 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 -0.1 -2.8 -0.6 N.D.
soil soil EcoFAB sample 2; outgrowth in LB -0.1 -0.1 -3.6 +0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +0.8 -3.3 -0.8 N.D.
no_plant_soil no_plant_soil sample 2; outgrowth in LB +0.1 +0.2 -3.9 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 -0.1 -1.5 -1.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.3 -2.8 -0.7 N.D.
carbon source Lauric (C) +0.1 -0.0 -2.9 -0.0 N.D.
soil soil sample 8; outgrowth in LB +0.1 -0.0 -3.0 +0.1 N.D.
root root EcoFAB sample 1; outgrowth in LB -0.2 +0.1 -2.8 +0.1 N.D.
carbon source butyrate (C) +0.0 +0.4 -2.5 -0.7 N.D.
soil soil sample 4; outgrowth in LB -0.1 +0.0 -3.0 +0.2 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.1 +0.2 -2.6 -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.2 -1.9 -1.1 N.D.
carbon source Pimelic (C) +0.3 +0.4 -3.0 -0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.2 -2.8 +0.5 N.D.
carbon source Pimelic (C) +0.2 +0.3 -3.1 +0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.3 -2.5 +0.3 N.D.
carbon source Azelaic (C) +0.3 +0.8 -1.4 -1.3 N.D.
carbon source Octanoic (C) +0.6 +0.1 -2.2 -0.2 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 -0.3 -2.0 +2.3 N.D.
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ABZR87_RS07025
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ABZR87_RS07030
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