Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS06725 and ABZR87_RS06730 are separated by 229 nucleotidesABZR87_RS06730 and ABZR87_RS06735 are separated by 148 nucleotidesABZR87_RS06735 and ABZR87_RS06740 are separated by 68 nucleotidesABZR87_RS06740 and ABZR87_RS06745 are separated by 69 nucleotides ABZR87_RS06725: ABZR87_RS06725 - phosphoenolpyruvate--protein phosphotransferase, at 1,429,074 to 1,430,825 _RS06725 ABZR87_RS06730: ABZR87_RS06730 - bacterioferritin-associated ferredoxin, at 1,431,055 to 1,431,330 _RS06730 ABZR87_RS06735: ABZR87_RS06735 - bacterioferritin, at 1,431,479 to 1,431,958 _RS06735 ABZR87_RS06740: ABZR87_RS06740 - molybdopterin-synthase adenylyltransferase MoeB, at 1,432,027 to 1,432,776 _RS06740 ABZR87_RS06745: ABZR87_RS06745 - S41 family peptidase, at 1,432,846 to 1,434,462 _RS06745
Group Condition ABZR87_RS06725 ABZR87_RS06730 ABZR87_RS06735 ABZR87_RS06740 ABZR87_RS06745
soil soil EcoFAB sample 1; outgrowth in LB -3.5 N.D. +0.0 N.D. -2.8
carbon source 4-Hydroxybenzoic Acid (C) -0.8 N.D. -0.1 N.D. -4.1
carbon source Heptanoic (C) -1.4 N.D. +0.0 N.D. -3.0
soil soil sample 5; outgrowth in LB -1.3 N.D. +0.3 N.D. -3.1
root root EcoFAB sample 1; outgrowth in LB -1.8 N.D. -0.2 N.D. -2.0
no_plant_soil no_plant_soil sample 1; outgrowth in LB -1.3 N.D. +0.0 N.D. -2.5
no_plant_soil no_plant_soil sample 3; outgrowth in LB -1.1 N.D. +0.2 N.D. -2.9
soil soil sample 3; outgrowth in LB -0.9 N.D. +0.1 N.D. -2.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.9 N.D. +0.1 N.D. -2.8
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -1.7 N.D. +0.2 N.D. -2.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.5 N.D. +0.5 N.D. -2.5
soil soil sample 2; outgrowth in LB -0.9 N.D. +0.1 N.D. -2.6
no_plant_soil no_plant_soil sample 2; outgrowth in LB -1.0 N.D. +0.2 N.D. -2.5
carbon source Heptanoic (C) -0.8 N.D. -0.1 N.D. -2.4
carbon source Beta-alanine (C) -3.1 N.D. -0.0 N.D. -0.1
carbon source Beta-alanine (C) -3.0 N.D. -0.1 N.D. -0.0
carbon source Lauric (C) -0.2 N.D. -0.4 N.D. -2.5
carbon source Dodecandioic (C) -0.8 N.D. +0.0 N.D. -2.1
soil soil sample 1; outgrowth in LB -0.9 N.D. +0.0 N.D. -2.0
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.7 N.D. -0.2 N.D. -1.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.3 N.D. +0.0 N.D. -1.5
micoeukaryotes Dictyostellum sp.mixed culture-2 -1.3 N.D. -0.1 N.D. -1.4
root root EcoFAB sample 2; outgrowth in LB -1.3 N.D. +0.2 N.D. -1.6
carbon source Sebacic (C) -0.2 N.D. +0.0 N.D. -2.5
carbon source Octanoic (C) -0.9 N.D. +0.2 N.D. -1.9
soil soil sample 8; outgrowth in LB -0.8 N.D. +0.2 N.D. -1.8
carbon source Sebacic (C) +0.7 N.D. -0.5 N.D. -2.0
carbon source Hexanoic (C) +0.7 N.D. +0.1 N.D. -2.1
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +3.1 N.D. +0.1 N.D. -2.3
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +2.4 N.D. +0.5 N.D. -1.9
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ABZR87_RS06725
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ABZR87_RS06730
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ABZR87_RS06740
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ABZR87_RS06745
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