Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS06595 and ABZR87_RS06600 are separated by 150 nucleotidesABZR87_RS06600 and ABZR87_RS06605 are separated by 90 nucleotidesABZR87_RS06605 and ABZR87_RS06610 are separated by 20 nucleotidesABZR87_RS06610 and ABZR87_RS06615 are separated by 91 nucleotides ABZR87_RS06595: ABZR87_RS06595 - DUF2917 domain-containing protein, at 1,404,523 to 1,404,882 _RS06595 ABZR87_RS06600: ABZR87_RS06600 - transcriptional regulator GcvA, at 1,405,033 to 1,405,995 _RS06600 ABZR87_RS06605: ABZR87_RS06605 - YbeD family protein, at 1,406,086 to 1,406,385 _RS06605 ABZR87_RS06610: ABZR87_RS06610 - D-alanyl-D-alanine carboxypeptidase family protein, at 1,406,406 to 1,407,608 _RS06610 ABZR87_RS06615: ABZR87_RS06615 - alpha/beta hydrolase, at 1,407,700 to 1,408,347 _RS06615
Group Condition ABZR87_RS06595 ABZR87_RS06600 ABZR87_RS06605 ABZR87_RS06610 ABZR87_RS06615
carbon source Octanoic (C) -3.3 -0.5 N.D. -0.8 N.D.
carbon source Lauric (C) +0.2 -0.2 N.D. -2.1 N.D.
nitrogen source nitrogen source nitrate 20mM -1.3 -0.2 N.D. +0.2 N.D.
nitrogen source nitrogen source nitrate 5mM -1.5 -0.0 N.D. +0.4 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -0.6 N.D. +0.3 N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.5 -1.2 N.D. +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.0 -0.2 N.D. +0.5 N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.5 -0.9 N.D. -0.1 N.D.
soil soil EcoFAB sample 2; outgrowth in LB +0.6 -0.7 N.D. +0.1 N.D.
root root EcoFAB sample 2; outgrowth in LB +0.9 -0.9 N.D. +0.1 N.D.
carbon source Heptanoic (C) -0.3 -0.3 N.D. +0.8 N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.7 -0.7 N.D. +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 +0.5 N.D. +0.4 N.D.
carbon source Protocatechuic Acid (C) -0.6 -0.1 N.D. +0.9 N.D.
carbon source Heptanoic (C) +0.1 -0.4 N.D. +0.8 N.D.
carbon source L-Glutamic (C) +1.0 -0.5 N.D. +0.0 N.D.
carbon source Suberic (C) +1.0 -0.2 N.D. +0.1 N.D.
carbon source Protocatechuic Acid (C) +0.8 -0.1 N.D. +0.6 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +2.0 -0.8 N.D. +0.0 N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB +1.4 -0.3 N.D. +0.1 N.D.
carbon source propionate (C) +1.1 -0.1 N.D. +0.3 N.D.
carbon source Azelaic (C) +1.2 -0.2 N.D. +0.4 N.D.
carbon source Pimelic (C) +0.4 +0.1 N.D. +1.0 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB +1.8 -0.2 N.D. -0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.8 +0.3 N.D. +0.4 N.D.
carbon source D-Glucose (C) +1.4 +0.1 N.D. +0.1 N.D.
nitrogen source nitrogen source nitrite 5mM +1.0 +0.5 N.D. +0.4 N.D.
carbon source Pimelic (C) +1.5 +0.1 N.D. +1.0 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +2.4 +0.2 N.D. +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +3.2 -0.3 N.D. +0.3 N.D.
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ABZR87_RS06600
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