Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS06485 and ABZR87_RS06490 are separated by 403 nucleotidesABZR87_RS06490 and ABZR87_RS06495 are separated by 74 nucleotidesABZR87_RS06495 and ABZR87_RS06500 are separated by 4 nucleotidesABZR87_RS06500 and ABZR87_RS06505 are separated by 101 nucleotides ABZR87_RS06485: ABZR87_RS06485 - glutathione peroxidase, at 1,381,054 to 1,381,749 _RS06485 ABZR87_RS06490: ABZR87_RS06490 - ferritin, at 1,382,153 to 1,383,007 _RS06490 ABZR87_RS06495: ABZR87_RS06495 - D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase, at 1,383,082 to 1,383,579 _RS06495 ABZR87_RS06500: ABZR87_RS06500 - SPOR domain-containing protein, at 1,383,584 to 1,384,357 _RS06500 ABZR87_RS06505: ABZR87_RS06505 - type III pantothenate kinase, at 1,384,459 to 1,385,340 _RS06505
Group Condition ABZR87_RS06485 ABZR87_RS06490 ABZR87_RS06495 ABZR87_RS06500 ABZR87_RS06505
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.2 N.D. -4.4 +0.0 N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.2 N.D. -4.3 +0.3 N.D.
carbon source 3-Hydroxypropionate (C) -0.1 N.D. -3.8 +0.1 N.D.
carbon source Octanoic (C) -0.6 N.D. -2.2 -0.9 N.D.
carbon source 1,2-Propanediol (C) +0.2 N.D. -4.0 +0.1 N.D.
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.0 N.D. -3.6 +0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.2 N.D. -3.4 +0.1 N.D.
soil soil sample 5; outgrowth in LB -0.0 N.D. -3.1 -0.3 N.D.
soil soil EcoFAB sample 1; outgrowth in LB -0.1 N.D. -3.6 +0.2 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.1 N.D. -3.1 +0.0 N.D.
nitrogen source nitrogen source nitrate 5mM -0.0 N.D. -2.9 -0.2 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.2 N.D. -2.6 -0.2 N.D.
carbon source Heptanoic (C) -0.2 N.D. -2.9 +0.1 N.D.
carbon source L-Glutamic (C) +0.1 N.D. -2.6 -0.5 N.D.
nitrogen source nitrogen source nitrate 5mM +0.1 N.D. -3.0 -0.0 N.D.
soil soil sample 6; outgrowth in LB -0.0 N.D. -2.8 -0.1 N.D.
carbon source D-Xylose (C) -0.3 N.D. -2.1 -0.4 N.D.
nitrogen source nitrogen source nitrate 20mM +0.2 N.D. -2.7 -0.3 N.D.
carbon source Lauric (C) -0.0 N.D. -3.2 +0.4 N.D.
nitrogen source nitrogen source nitrite 5mM +0.2 N.D. -2.8 +0.2 N.D.
root root sample 4; outgrowth in LB -0.2 N.D. +1.9 -0.7 N.D.
rhizosphere rhizosphere sample 6; outgrowth in LB +0.0 N.D. +2.1 -0.6 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB +0.0 N.D. +2.4 -0.5 N.D.
root root EcoFAB sample 2; outgrowth in LB -0.2 N.D. +2.3 +0.3 N.D.
root root sample 5; outgrowth in LB -0.2 N.D. +2.7 -0.1 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB -0.1 N.D. +2.4 +0.1 N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB +0.0 N.D. +3.1 -0.3 N.D.
root root sample 6; outgrowth in LB +0.2 N.D. +2.3 +0.5 N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -0.1 N.D. +3.1 +0.2 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -0.1 N.D. +3.5 -0.1 N.D.
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