Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS06375 and ABZR87_RS06380 are separated by 141 nucleotidesABZR87_RS06380 and ABZR87_RS06385 are separated by 219 nucleotidesABZR87_RS06385 and ABZR87_RS06390 are separated by 85 nucleotidesABZR87_RS06390 and ABZR87_RS06395 are separated by 72 nucleotides ABZR87_RS06375: ABZR87_RS06375 - DUF883 family protein, at 1,360,636 to 1,361,061 _RS06375 ABZR87_RS06380: ABZR87_RS06380 - DUF1328 family protein, at 1,361,203 to 1,361,376 _RS06380 ABZR87_RS06385: ABZR87_RS06385 - CHASE3 domain-containing protein, at 1,361,596 to 1,363,038 _RS06385 ABZR87_RS06390: ABZR87_RS06390 - entericidin A/B family lipoprotein, at 1,363,124 to 1,363,264 _RS06390 ABZR87_RS06395: ABZR87_RS06395 - response regulator, at 1,363,337 to 1,363,777 _RS06395
Group Condition ABZR87_RS06375 ABZR87_RS06380 ABZR87_RS06385 ABZR87_RS06390 ABZR87_RS06395
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.4 -4.7 -0.5 -2.1
carbon source Lauric (C) N.D. +0.1 -3.6 +0.3 -2.0
carbon source Octanoic (C) N.D. +0.2 -4.0 +0.2 -0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.7 -2.1 -0.3 -1.6
carbon source Octanoic (C) N.D. +0.2 -3.3 +0.8 -1.0
soil soil sample 6; outgrowth in LB N.D. -0.1 -3.2 -0.3 +0.8
carbon source Heptanoic (C) N.D. +1.3 -3.4 +0.3 -0.6
carbon source Heptanoic (C) N.D. +1.4 -3.7 +0.0 -0.1
soil soil sample 8; outgrowth in LB N.D. +0.1 -3.2 -0.1 +1.2
soil soil sample 7; outgrowth in LB N.D. -0.2 -2.9 -0.0 +1.2
soil soil sample 5; outgrowth in LB N.D. -0.3 -2.7 +0.2 +1.3
carbon source Dodecandioic (C) N.D. +0.6 -3.2 +0.1 +1.1
soil soil sample 2; outgrowth in LB N.D. +0.3 -2.9 +0.0 +1.2
carbon source Sebacic (C) N.D. +0.7 -3.3 +0.4 +0.8
soil soil sample 3; outgrowth in LB N.D. -0.2 -2.4 +0.3 +1.1
soil soil sample 4; outgrowth in LB N.D. -0.2 -2.5 -0.3 +1.9
soil soil sample 9; outgrowth in LB N.D. +0.3 -2.2 -0.1 +2.0
soil soil sample 1; outgrowth in LB N.D. +0.3 -1.9 +0.1 +1.8
rhizosphere rhizosphere sample 8; outgrowth in LB N.D. -0.4 -0.9 -0.1 +2.6
rhizosphere rhizosphere sample 5; outgrowth in LB N.D. +0.2 -1.4 -0.0 +2.5
rhizosphere rhizosphere sample 7; outgrowth in LB N.D. -0.4 -1.3 +0.3 +2.8
rhizosphere rhizosphere sample 9; outgrowth in LB N.D. -0.4 -0.3 -0.2 +3.0
root root sample 6; outgrowth in LB N.D. -0.7 +1.1 -0.3 +2.4
micoeukaryotes Dictyostellum sp.mixed culture-1 N.D. -0.1 +3.9 +0.2 -1.2
micoeukaryotes Dictyostellum sp.mixed culture-2 N.D. +0.3 +4.1 +0.2 -0.9
micoeukaryotes C.elegans, mixed culture-2 N.D. +0.1 +4.2 -0.1 -0.3
micoeukaryotes C.elegans, mixed culture-1 N.D. +0.0 +4.2 +0.2 -0.3
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB N.D. -0.4 +8.5 +0.3 -0.3
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB N.D. -0.5 +9.2 +0.1 +0.1
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB N.D. +0.6 +7.4 +0.2 +0.9
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ABZR87_RS06375
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ABZR87_RS06380
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ABZR87_RS06390
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ABZR87_RS06395
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