Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS06270 and ABZR87_RS06275 overlap by 4 nucleotidesABZR87_RS06275 and ABZR87_RS06280 are separated by 29 nucleotidesABZR87_RS06280 and ABZR87_RS06285 are separated by 28 nucleotidesABZR87_RS06285 and ABZR87_RS06290 overlap by 1 nucleotides ABZR87_RS06270: ABZR87_RS06270 - enoyl-CoA hydratase/isomerase family protein, at 1,339,700 to 1,340,494 _RS06270 ABZR87_RS06275: ABZR87_RS06275 - prolyl oligopeptidase family serine peptidase, at 1,340,491 to 1,341,435 _RS06275 ABZR87_RS06280: ABZR87_RS06280 - carboxyl transferase domain-containing protein, at 1,341,465 to 1,343,072 _RS06280 ABZR87_RS06285: ABZR87_RS06285 - YchJ family protein, at 1,343,101 to 1,343,541 _RS06285 ABZR87_RS06290: ABZR87_RS06290 - HAD family phosphatase, at 1,343,541 to 1,344,239 _RS06290
Group Condition ABZR87_RS06270 ABZR87_RS06275 ABZR87_RS06280 ABZR87_RS06285 ABZR87_RS06290
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -3.4 -0.1 -2.2 -0.1 -0.3
carbon source Sebacic (C) -1.0 -0.4 -2.1 +0.3 -0.7
soil soil EcoFAB sample 1; outgrowth in LB -1.5 -0.2 -2.1 -0.5 +0.6
carbon source Octanoic (C) -0.3 +0.7 -2.0 -1.4 -0.2
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.7 -0.1 -1.4 -0.2 -0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.5 +0.0 -0.9 +0.4 -0.7
carbon source Octanoic (C) -1.2 +0.4 -1.1 -0.8 -0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.5 +0.0 -1.0 -0.4 +0.3
root root sample 5; outgrowth in LB -1.4 -0.1 -0.6 -0.4 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.8 -0.1 -0.7 -0.4 -0.3
soil soil EcoFAB sample 2; outgrowth in LB -0.8 +0.2 -0.7 -0.2 -0.9
carbon source D-Xylose (C) -0.8 -0.2 -0.5 -0.3 -0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.9 -0.2 -0.9 -0.1 -0.2
root root sample 6; outgrowth in LB -1.4 +0.2 -0.8 -0.3 +0.1
micoeukaryotes Dictyostellum sp.mixed culture-2 -1.0 -0.0 -0.9 -0.3 +0.1
carbon source Azelaic (C) -0.0 -0.3 -0.9 -0.2 -0.6
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.2 +0.2 -1.0 -0.1 +0.1
micoeukaryotes C.elegans, mixed culture-1 -0.9 -0.2 -0.8 -0.2 +0.1
soil soil sample 5; outgrowth in LB -0.3 -0.3 -0.4 -0.6 -0.3
rhizosphere rhizosphere sample 2; outgrowth in LB -0.7 -0.1 -0.6 -0.5 +0.1
root root EcoFAB sample 2; outgrowth in LB -0.8 -0.6 -0.9 +0.2 +0.3
root root EcoFAB sample 1; outgrowth in LB -0.6 +0.1 -0.9 +0.0 -0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.1 -0.0 -0.8 +0.5 -0.2
rhizosphere rhizosphere sample 5; outgrowth in LB +0.2 -0.3 -0.4 -0.2 -0.8
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.1 +0.4 -0.4 +0.0 -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 +0.4 -0.2 -0.7 -0.1
rhizosphere rhizosphere sample 9; outgrowth in LB +0.4 -0.1 -0.1 -1.0 -0.4
rhizosphere rhizosphere sample 7; outgrowth in LB -0.3 -0.4 -0.5 -0.4 +0.4
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -0.4 -1.1 +0.6 +0.4
carbon source Protocatechuic Acid (C) +0.9 +0.1 +0.2 +0.4 +0.4
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ABZR87_RS06270
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ABZR87_RS06275
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