Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS06220 and ABZR87_RS06225 are separated by 77 nucleotidesABZR87_RS06225 and ABZR87_RS06230 are separated by 6 nucleotidesABZR87_RS06230 and ABZR87_RS06235 are separated by 61 nucleotidesABZR87_RS06235 and ABZR87_RS06240 are separated by 12 nucleotides ABZR87_RS06220: ABZR87_RS06220 - biotin carboxylase N-terminal domain-containing protein, at 1,327,688 to 1,329,682 _RS06220 ABZR87_RS06225: ABZR87_RS06225 - AMP-binding protein, at 1,329,760 to 1,331,346 _RS06225 ABZR87_RS06230: ABZR87_RS06230 - TetR/AcrR family transcriptional regulator, at 1,331,353 to 1,332,042 _RS06230 ABZR87_RS06235: ABZR87_RS06235 - MBL fold metallo-hydrolase, at 1,332,104 to 1,333,057 _RS06235 ABZR87_RS06240: ABZR87_RS06240 - DUF1289 domain-containing protein, at 1,333,070 to 1,333,336 _RS06240
Group Condition ABZR87_RS06220 ABZR87_RS06225 ABZR87_RS06230 ABZR87_RS06235 ABZR87_RS06240
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -0.1 -1.4 -0.3 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.0 +0.1 -0.3 -1.6 N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.0 +0.3 -0.4 -1.6 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.1 -0.2 -0.3 -0.9 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.1 -0.2 -0.8 -0.8 N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.3 +0.1 -0.4 -1.5 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.1 -0.6 -0.8 N.D.
carbon source Octanoic (C) +0.1 +0.1 -0.9 -0.4 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -0.4 -0.3 -0.1 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.0 -0.1 -0.4 -0.7 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB -0.1 -0.0 -0.4 -0.6 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.0 -0.4 -0.4 N.D.
carbon source 3-Hydroxypropionate (C) -0.2 -0.0 -0.1 -0.6 N.D.
carbon source Lauric (C) -0.2 -0.3 +0.0 -0.5 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.4 -0.8 +0.0 N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB -0.0 +0.1 -0.6 -0.4 N.D.
carbon source Disodium Glutarate (C) -0.4 -0.2 +0.2 -0.4 N.D.
carbon source butyrate (C) +0.0 +0.1 -0.6 -0.3 N.D.
root root sample 6; outgrowth in LB +0.1 +0.1 -0.5 -0.4 N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.2 -0.2 -0.4 +0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.1 -0.7 +0.5 N.D.
carbon source Protocatechuic Acid (C) -0.3 +0.3 +0.1 -0.4 N.D.
carbon source Sebacic (C) +0.6 +0.2 +0.4 -1.1 N.D.
root root sample 5; outgrowth in LB +0.3 +0.4 -0.7 +0.2 N.D.
carbon source Sebacic (C) +0.2 +0.3 +0.1 -0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.0 +0.9 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.0 -0.1 +0.6 N.D.
carbon source Octanoic (C) +0.0 -0.1 +0.6 +0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.2 -0.3 +0.7 N.D.
carbon source Dodecandioic (C) +0.5 +0.3 +0.4 +0.0 N.D.
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ABZR87_RS06220
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ABZR87_RS06225
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ABZR87_RS06235
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ABZR87_RS06240
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