Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS06120	ABZR87_RS06125	ABZR87_RS06130	ABZR87_RS06135	ABZR87_RS06140
root	root EcoFAB sample 2; outgrowth in LB	-0.2	-0.4	-0.8	-0.3	+0.0
nitrogen source	nitrogen source nitrate 20mM	+0.1	-0.3	-0.1	-0.3	-0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	-0.1	+0.2	-0.3	-0.5
soil	soil sample 4; outgrowth in LB	+0.2	+0.1	-0.8	-0.1	-0.2
carbon source	Trans-2-methyl-2-butenoic (C)	+0.1	+0.0	-0.5	-0.0	-0.4
carbon source	Protocatechuic Acid (C)	-0.0	+0.2	-0.6	-0.5	+0.1
carbon source	Sebacic (C)	-0.2	+0.8	-0.5	+0.2	-0.9
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.1	+0.0	-0.1	+0.3	-0.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-0.4	-0.7	+0.7	-0.1
phage	Ra3_1	-0.3	-0.4	+0.3	-0.3	+0.1
root	root sample 6; outgrowth in LB	-0.0	+0.8	-0.7	-0.5	-0.1
nitrogen source	nitrogen source nitrate 5mM	-0.0	+0.2	+0.3	-0.1	-0.6
carbon source	D-Xylose (C)	+0.1	+0.2	-0.3	+0.2	-0.5
carbon source	butyrate (C)	-0.2	-0.3	+0.1	-0.1	+0.3
rhizosphere	rhizosphere sample 3; outgrowth in LB	-0.0	-0.6	+0.1	+0.4	-0.1
phage	Ra3_0.1	+0.2	-0.1	+0.3	-0.1	-0.4
carbon source	L-Glutamic (C)	+0.1	+0.1	-0.8	+0.2	+0.4
root	root sample 4; outgrowth in LB	-0.0	+0.2	-0.6	+0.3	+0.3
carbon source	Hexanoic (C)	+0.0	+0.3	-0.7	+0.1	+0.5
carbon source	Dodecandioic (C)	+0.2	+0.5	-0.6	+0.1	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.4	+0.7	-0.4	-0.1	+0.6
micoeukaryotes	Dictyostellum sp.mixed culture-1	-0.1	-0.2	+0.7	-0.1	+0.2
carbon source	Sebacic (C)	+0.0	+0.3	-0.3	+0.2	+0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.0	+0.0	+0.9	-0.1	-0.0
soil	soil sample 7; outgrowth in LB	-0.1	+0.2	+0.5	+0.1	+0.2
rhizosphere	rhizosphere sample 6; outgrowth in LB	+0.3	+0.4	+0.4	-0.1	+0.1
carbon source	4-Hydroxybenzoic Acid (C)	+0.1	+0.3	+0.3	-0.1	+0.5
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.1	+0.1	+0.9	+0.2	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.0	+0.2	+0.6	-0.0	+0.5
carbon source	Octanoic (C)	+0.1	+1.1	+0.4	-0.2	+0.5