Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS05955 and ABZR87_RS05960 are separated by 22 nucleotidesABZR87_RS05960 and ABZR87_RS05965 are separated by 30 nucleotidesABZR87_RS05965 and ABZR87_RS05970 are separated by 199 nucleotidesABZR87_RS05970 and ABZR87_RS05975 are separated by 61 nucleotides ABZR87_RS05955: ABZR87_RS05955 - RNA 3'-terminal phosphate cyclase, at 1,272,865 to 1,273,932 _RS05955 ABZR87_RS05960: ABZR87_RS05960 - thiamine pyrophosphate-requiring protein, at 1,273,955 to 1,275,751 _RS05960 ABZR87_RS05965: ABZR87_RS05965 - hemerythrin domain-containing protein, at 1,275,782 to 1,276,258 _RS05965 ABZR87_RS05970: ABZR87_RS05970 - PRC-barrel domain-containing protein, at 1,276,458 to 1,276,928 _RS05970 ABZR87_RS05975: ABZR87_RS05975 - hypothetical protein, at 1,276,990 to 1,277,178 _RS05975
Group Condition ABZR87_RS05955 ABZR87_RS05960 ABZR87_RS05965 ABZR87_RS05970 ABZR87_RS05975
carbon source Azelaic (C) +0.1 +0.1 -2.7 -0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.2 -2.4 -0.3 N.D.
root root sample 5; outgrowth in LB +0.2 +0.1 -2.5 +0.0 N.D.
root root EcoFAB sample 2; outgrowth in LB -0.6 -0.1 -1.0 -0.3 N.D.
carbon source Octanoic (C) -0.5 -0.6 +0.4 -1.1 N.D.
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.4 +0.2 -1.2 -0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.2 -1.8 -0.2 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB +0.2 +0.2 -1.8 -0.1 N.D.
nitrogen source nitrogen source nitrite 5mM +0.1 -0.2 -1.8 +0.4 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB +0.4 +0.1 -1.9 +0.2 N.D.
nitrogen source nitrogen source nitrite 0.5mM +0.2 +0.0 -1.3 -0.1 N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.2 +0.1 -2.0 +0.6 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.1 +0.3 -1.1 -0.0 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.1 -0.0 -1.3 +0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.1 -0.8 -0.4 N.D.
soil soil sample 5; outgrowth in LB +0.3 +0.1 -1.5 +0.5 N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.1 +0.2 -1.1 +0.5 N.D.
rhizosphere rhizosphere sample 5; outgrowth in LB +0.3 -0.0 -1.2 +0.5 N.D.
carbon source L-Glutamic (C) +0.3 +0.2 -0.5 -0.4 N.D.
carbon source Heptanoic (C) -0.3 +0.1 +0.5 -0.6 N.D.
soil soil sample 8; outgrowth in LB +0.2 +0.0 -0.8 +0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.3 -0.4 +0.8 N.D.
carbon source adipate (C) -0.1 -0.4 +0.8 -0.2 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.5 -0.1 +0.4 +0.5 N.D.
carbon source Lauric (C) -0.1 +0.0 +0.8 -0.5 N.D.
phage Ra1_0.01 -0.5 -0.2 +1.0 +0.2 N.D.
carbon source Pimelic (C) +0.0 +0.1 +1.2 +0.1 N.D.
carbon source Sebacic (C) +0.4 +0.3 +1.1 -0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -0.2 +0.1 +2.3 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 -0.2 -0.5 +2.1 N.D.
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