Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS05365 and ABZR87_RS05370 overlap by 4 nucleotidesABZR87_RS05370 and ABZR87_RS05375 are separated by 62 nucleotidesABZR87_RS05375 and ABZR87_RS05380 are separated by 629 nucleotidesABZR87_RS05380 and ABZR87_RS05385 are separated by 276 nucleotides ABZR87_RS05365: ABZR87_RS05365 - membrane protein insertion efficiency factor YidD, at 1,130,079 to 1,130,393 _RS05365 ABZR87_RS05370: ABZR87_RS05370 - ribonuclease P protein component, at 1,130,390 to 1,130,812 _RS05370 ABZR87_RS05375: ABZR87_RS05375 - 50S ribosomal protein L34, at 1,130,875 to 1,131,009 _RS05375 ABZR87_RS05380: ABZR87_RS05380 - chromosomal replication initiator protein DnaA, at 1,131,639 to 1,133,228 _RS05380 ABZR87_RS05385: ABZR87_RS05385 - DNA polymerase III subunit beta, at 1,133,505 to 1,134,620 _RS05385
Group Condition ABZR87_RS05365 ABZR87_RS05370 ABZR87_RS05375 ABZR87_RS05380 ABZR87_RS05385
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.1 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.8 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.8 N.D. N.D. N.D. N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -0.6 N.D. N.D. N.D. N.D.
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.5 N.D. N.D. N.D. N.D.
soil soil sample 6; outgrowth in LB -0.5 N.D. N.D. N.D. N.D.
root root sample 6; outgrowth in LB -0.5 N.D. N.D. N.D. N.D.
soil soil sample 3; outgrowth in LB -0.5 N.D. N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.5 N.D. N.D. N.D. N.D.
root root sample 4; outgrowth in LB -0.5 N.D. N.D. N.D. N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB -0.5 N.D. N.D. N.D. N.D.
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.5 N.D. N.D. N.D. N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -0.5 N.D. N.D. N.D. N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.4 N.D. N.D. N.D. N.D.
carbon source D-Xylose (C) -0.4 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 N.D. N.D. N.D. N.D.
soil soil EcoFAB sample 2; outgrowth in LB -0.4 N.D. N.D. N.D. N.D.
soil soil EcoFAB sample 1; outgrowth in LB -0.4 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 N.D. N.D. N.D. N.D.
root root EcoFAB sample 1; outgrowth in LB -0.4 N.D. N.D. N.D. N.D.
soil soil sample 8; outgrowth in LB -0.4 N.D. N.D. N.D. N.D.
carbon source Heptanoic (C) +0.5 N.D. N.D. N.D. N.D.
carbon source Octanoic (C) +0.6 N.D. N.D. N.D. N.D.
carbon source Azelaic (C) +0.6 N.D. N.D. N.D. N.D.
carbon source Protocatechuic Acid (C) +0.6 N.D. N.D. N.D. N.D.
carbon source Sebacic (C) +0.7 N.D. N.D. N.D. N.D.
carbon source Protocatechuic Acid (C) +0.7 N.D. N.D. N.D. N.D.
carbon source Dodecandioic (C) +0.8 N.D. N.D. N.D. N.D.
carbon source Dodecandioic (C) +0.9 N.D. N.D. N.D. N.D.
carbon source Sebacic (C) +0.9 N.D. N.D. N.D. N.D.
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ABZR87_RS05370
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