Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS05355 and ABZR87_RS05360 are separated by 73 nucleotidesABZR87_RS05360 and ABZR87_RS05365 are separated by 6 nucleotidesABZR87_RS05365 and ABZR87_RS05370 overlap by 4 nucleotidesABZR87_RS05370 and ABZR87_RS05375 are separated by 62 nucleotides ABZR87_RS05355: ABZR87_RS05355 - VOC family protein, at 1,127,936 to 1,128,334 _RS05355 ABZR87_RS05360: ABZR87_RS05360 - membrane protein insertase YidC, at 1,128,408 to 1,130,072 _RS05360 ABZR87_RS05365: ABZR87_RS05365 - membrane protein insertion efficiency factor YidD, at 1,130,079 to 1,130,393 _RS05365 ABZR87_RS05370: ABZR87_RS05370 - ribonuclease P protein component, at 1,130,390 to 1,130,812 _RS05370 ABZR87_RS05375: ABZR87_RS05375 - 50S ribosomal protein L34, at 1,130,875 to 1,131,009 _RS05375
Group Condition ABZR87_RS05355 ABZR87_RS05360 ABZR87_RS05365 ABZR87_RS05370 ABZR87_RS05375
rhizosphere rhizosphere sample 1; outgrowth in LB -0.6 N.D. -0.6 N.D. N.D.
root root sample 6; outgrowth in LB -0.5 N.D. -0.5 N.D. N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 N.D. -1.1 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.4 N.D. -0.5 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 N.D. -0.8 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 N.D. -0.8 N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.3 N.D. -0.4 N.D. N.D.
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.1 N.D. -0.5 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 N.D. -0.4 N.D. N.D.
micoeukaryotes C.elegans, mixed culture-1 -0.2 N.D. -0.3 N.D. N.D.
soil soil sample 9; outgrowth in LB -0.2 N.D. -0.4 N.D. N.D.
soil soil sample 3; outgrowth in LB +0.1 N.D. -0.5 N.D. N.D.
soil soil sample 6; outgrowth in LB +0.1 N.D. -0.5 N.D. N.D.
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.2 N.D. -0.5 N.D. N.D.
root root sample 4; outgrowth in LB +0.4 N.D. -0.5 N.D. N.D.
root root EcoFAB sample 1; outgrowth in LB +0.3 N.D. -0.4 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 N.D. -0.4 N.D. N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB +0.4 N.D. -0.5 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 N.D. -0.4 N.D. N.D.
carbon source Octanoic (C) -0.2 N.D. +0.6 N.D. N.D.
carbon source Protocatechuic Acid (C) -0.2 N.D. +0.7 N.D. N.D.
carbon source Sebacic (C) -0.1 N.D. +0.7 N.D. N.D.
carbon source Heptanoic (C) +0.0 N.D. +0.5 N.D. N.D.
carbon source Protocatechuic Acid (C) -0.0 N.D. +0.6 N.D. N.D.
carbon source Octanoic (C) +0.4 N.D. +0.2 N.D. N.D.
carbon source Azelaic (C) +0.2 N.D. +0.6 N.D. N.D.
carbon source Dodecandioic (C) -0.0 N.D. +0.8 N.D. N.D.
carbon source Dodecandioic (C) -0.0 N.D. +0.9 N.D. N.D.
root root sample 5; outgrowth in LB +0.9 N.D. +0.2 N.D. N.D.
carbon source Sebacic (C) +0.3 N.D. +0.9 N.D. N.D.
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