Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS05200 and ABZR87_RS05205 overlap by 4 nucleotidesABZR87_RS05205 and ABZR87_RS05210 are separated by 102 nucleotidesABZR87_RS05210 and ABZR87_RS05215 are separated by 75 nucleotidesABZR87_RS05215 and ABZR87_RS05220 are separated by 8 nucleotides ABZR87_RS05200: ABZR87_RS05200 - homoserine O-acetyltransferase, at 1,092,920 to 1,094,134 _RS05200 ABZR87_RS05205: ABZR87_RS05205 - methionine biosynthesis protein MetW, at 1,094,131 to 1,094,766 _RS05205 ABZR87_RS05210: ABZR87_RS05210 - tetratricopeptide repeat protein, at 1,094,869 to 1,095,615 _RS05210 ABZR87_RS05215: ABZR87_RS05215 - YbdD/YjiX family protein, at 1,095,691 to 1,095,885 _RS05215 ABZR87_RS05220: ABZR87_RS05220 - carbon starvation CstA family protein, at 1,095,894 to 1,097,948 _RS05220
Group Condition ABZR87_RS05200 ABZR87_RS05205 ABZR87_RS05210 ABZR87_RS05215 ABZR87_RS05220
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -5.4 -2.5 +0.0 +0.3 -0.0
carbon source D-Galactose (C) -6.2 -1.2 -0.1 +0.0 -0.2
carbon source D-Galactose (C) -6.0 -0.8 -0.1 -0.1 -0.0
no_plant_soil no_plant_soil sample 1; outgrowth in LB -4.9 -2.1 -0.0 +0.1 -0.1
carbon source Pimelic (C) -6.1 -0.7 -0.0 -0.2 +0.0
carbon source Sebacic (C) -5.1 -1.0 -0.5 -0.4 +0.1
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -5.2 -1.4 -0.1 -0.2 -0.0
carbon source Trans-2-methyl-2-butenoic (C) -5.9 -0.7 -0.1 -0.0 -0.2
carbon source Carbon source D-Glucose 10 mM -5.5 -1.3 -0.0 -0.0 +0.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB -5.6 -1.2 +0.3 -0.2 -0.1
carbon source Octanoic (C) -4.7 -2.2 +0.1 +0.1 -0.1
carbon source Dodecandioic (C) -5.4 -1.3 +0.2 -0.3 +0.1
carbon source 4-Hydroxybenzoic Acid (C) -5.8 -0.6 -0.3 +0.2 -0.3
carbon source Lauric (C) -6.0 -0.8 -0.0 +0.0 +0.1
carbon source Azelaic (C) -4.9 -2.0 +0.1 +0.1 +0.0
carbon source Heptanoic (C) -5.5 -1.3 +0.2 -0.0 -0.0
nitrogen source nitrogen source nitrate 20mM -5.3 -1.0 -0.1 -0.3 +0.1
carbon source Protocatechuic Acid (C) -6.0 -0.7 -0.0 +0.1 +0.0
carbon source D-Glucose (C) -5.6 -0.7 -0.1 -0.2 -0.0
carbon source Protocatechuic Acid (C) -6.0 -0.6 -0.1 +0.2 -0.0
carbon source Heptanoic (C) -5.5 -1.4 -0.1 +0.5 -0.1
nitrogen source nitrogen source Ammonium chloride 20mM -5.7 -0.9 -0.2 +0.3 -0.0
carbon source Sebacic (C) -5.3 -1.1 -0.0 -0.1 +0.1
root root sample 5; outgrowth in LB -3.1 -3.2 +0.1 -0.3 +0.0
carbon source D-Glucose (C) -5.1 -1.3 +0.1 -0.1 +0.0
nitrogen source nitrogen source Ammonium chloride 20mM -6.0 -0.5 -0.1 +0.0 +0.1
carbon source Trans-2-methyl-2-butenoic (C) -5.7 -0.6 -0.1 -0.1 +0.1
nitrogen source nitrogen source nitrate 20mM -5.7 -0.8 -0.2 +0.3 +0.1
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -4.7 -1.7 +0.2 +0.0 +0.0
carbon source Octanoic (C) -4.6 -1.3 -0.0 +1.0 +0.2
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ABZR87_RS05205
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ABZR87_RS05215
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