Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS05185 and ABZR87_RS05190 are separated by 153 nucleotidesABZR87_RS05190 and ABZR87_RS05195 are separated by 4 nucleotidesABZR87_RS05195 and ABZR87_RS05200 are separated by 278 nucleotidesABZR87_RS05200 and ABZR87_RS05205 overlap by 4 nucleotides ABZR87_RS05185: ABZR87_RS05185 - PLP-dependent aminotransferase family protein, at 1,088,186 to 1,089,700 _RS05185 ABZR87_RS05190: ABZR87_RS05190 - 4-aminobutyrate--2-oxoglutarate transaminase, at 1,089,854 to 1,091,134 _RS05190 ABZR87_RS05195: ABZR87_RS05195 - NAD-dependent succinate-semialdehyde dehydrogenase, at 1,091,139 to 1,092,641 _RS05195 ABZR87_RS05200: ABZR87_RS05200 - homoserine O-acetyltransferase, at 1,092,920 to 1,094,134 _RS05200 ABZR87_RS05205: ABZR87_RS05205 - methionine biosynthesis protein MetW, at 1,094,131 to 1,094,766 _RS05205
Group Condition ABZR87_RS05185 ABZR87_RS05190 ABZR87_RS05195 ABZR87_RS05200 ABZR87_RS05205
carbon source D-Galactose (C) -0.0 +0.1 -0.2 -6.2 -1.2
carbon source Octanoic (C) -0.3 +0.1 -0.3 -4.7 -2.2
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 -0.0 -0.3 -5.7 -0.9
carbon source D-Galactose (C) -0.1 -0.0 -0.1 -6.0 -0.8
carbon source Protocatechuic Acid (C) -0.1 -0.0 -0.1 -6.0 -0.7
carbon source Carbon source D-Glucose 10 mM +0.0 -0.1 +0.1 -5.5 -1.3
carbon source Pimelic (C) -0.0 +0.1 -0.0 -6.1 -0.7
carbon source Azelaic (C) -0.2 +0.0 +0.3 -4.9 -2.0
carbon source Trans-2-methyl-2-butenoic (C) -0.0 -0.0 -0.1 -5.9 -0.7
carbon source Protocatechuic Acid (C) -0.1 +0.1 -0.1 -6.0 -0.6
carbon source Heptanoic (C) -0.2 +0.2 +0.2 -5.5 -1.4
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.0 +0.2 +0.1 -4.9 -2.1
nitrogen source nitrogen source nitrate 20mM -0.1 -0.0 +0.1 -5.7 -0.8
carbon source Lauric (C) -0.0 +0.1 +0.1 -6.0 -0.8
carbon source Dodecandioic (C) -0.0 -0.1 +0.3 -5.4 -1.3
no_plant_soil no_plant_soil sample 3; outgrowth in LB +0.1 +0.1 +0.1 -5.6 -1.2
carbon source Trans-2-methyl-2-butenoic (C) +0.0 -0.2 -0.0 -5.7 -0.6
carbon source Heptanoic (C) -0.0 +0.0 +0.3 -5.5 -1.3
nitrogen source nitrogen source Ammonium chloride 20mM -0.0 +0.1 -0.0 -6.0 -0.5
carbon source D-Glucose (C) -0.2 -0.0 +0.1 -5.6 -0.7
carbon source D-Glucose (C) -0.1 +0.1 +0.0 -5.1 -1.3
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.0 +0.1 -5.8 -0.6
carbon source Sebacic (C) -0.1 +0.0 +0.2 -5.3 -1.1
root root sample 5; outgrowth in LB +0.1 -0.2 +0.2 -3.1 -3.2
nitrogen source nitrogen source nitrate 20mM -0.0 +0.2 +0.1 -5.3 -1.0
carbon source D-Glucose (C) -0.0 +0.2 +0.2 -5.3 -0.9
carbon source Octanoic (C) +0.3 -0.1 +0.2 -4.6 -1.3
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.1 +3.2 +0.0 -5.4 -2.5
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.1 +2.1 -0.2 -4.7 -1.7
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.1 +2.1 +0.2 -5.2 -1.4
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ABZR87_RS05185
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ABZR87_RS05190
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ABZR87_RS05200
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ABZR87_RS05205
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