Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS05110	ABZR87_RS05115	ABZR87_RS05120	ABZR87_RS05125	ABZR87_RS05130
carbon source	Octanoic (C)	+0.2	-0.8	-0.6	+0.3	-4.2
carbon source	Azelaic (C)	+0.2	-0.0	-0.2	+0.0	-4.4
carbon source	Octanoic (C)	+0.2	-1.7	-0.8	-0.4	-1.7
soil	soil sample 4; outgrowth in LB	+0.2	-0.0	-0.1	+0.0	-4.3
nitrogen source	nitrogen source nitrate 5mM	-0.1	-0.3	-0.5	-0.0	-2.4
carbon source	Suberic (C)	+0.0	-0.3	-0.4	-0.1	-2.2
root	root EcoFAB sample 1; outgrowth in LB	+0.1	-0.9	-0.7	-0.3	-1.1
carbon source	Dodecandioic (C)	+0.1	-0.5	-0.3	-0.1	-2.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.6	-0.8	-0.5	+0.1	-2.1
carbon source	Pimelic (C)	-0.0	-0.5	-0.2	+0.0	-1.8
carbon source	Heptanoic (C)	+0.0	-0.7	-0.7	+0.0	-1.2
root	root EcoFAB sample 2; outgrowth in LB	+0.1	-0.4	-1.1	-0.0	-0.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.3	-1.0	-0.6	-0.1	-0.6
carbon source	butyrate (C)	-0.0	-0.3	-0.1	+0.2	-1.8
carbon source	4-Hydroxybenzoic Acid (C)	-0.0	-1.6	-1.4	-0.5	+1.4
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	+0.3	+1.1	+0.5	+0.1	-3.9
carbon source	Lauric (C)	-0.0	-0.8	-1.3	+0.0	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.0	-0.6	-0.5	+0.5	-1.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.1	+0.4	-0.1	-0.2	-1.6
micoeukaryotes	Acanthamoeba sp., muxed culture-1	+0.0	+0.5	+0.2	-0.1	-1.4
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	+0.0	-0.5	-1.0	-0.0	+1.2
soil	soil EcoFAB sample 1; outgrowth in LB	+0.1	-0.8	-0.3	-0.2	+1.0
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.3	-0.4	+1.2	+0.1	-0.8
nitrogen source	nitrogen source nitrate 20mM	+0.1	-0.2	-0.5	-0.1	+1.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-1.7	-0.2	-0.3	+2.8
phage	Ra1_0.1	-0.3	+1.0	+1.1	+0.1	-1.1
nitrogen source	nitrogen source nitrite 0.5mM	+0.3	-0.5	+0.5	-0.2	+1.2
carbon source	L-Glutamic (C)	-0.1	-0.4	+1.1	-0.4	+1.4
root	root sample 6; outgrowth in LB	-0.1	+1.1	+0.4	-0.3	+0.8
phage	Ra3_1	-0.2	+1.1	+1.1	-0.0	-0.1