Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS04695 and ABZR87_RS04700 are separated by 73 nucleotidesABZR87_RS04700 and ABZR87_RS04705 overlap by 4 nucleotidesABZR87_RS04705 and ABZR87_RS04710 are separated by 2 nucleotidesABZR87_RS04710 and ABZR87_RS04715 are separated by 20 nucleotides ABZR87_RS04695: ABZR87_RS04695 - hypothetical protein, at 980,399 to 980,788 _RS04695 ABZR87_RS04700: ABZR87_RS04700 - FAD-binding oxidoreductase, at 980,862 to 982,181 _RS04700 ABZR87_RS04705: ABZR87_RS04705 - amino acid ABC transporter ATP-binding protein, at 982,178 to 982,939 _RS04705 ABZR87_RS04710: ABZR87_RS04710 - ectoine/hydroxyectoine ABC transporter permease subunit EhuD, at 982,942 to 983,613 _RS04710 ABZR87_RS04715: ABZR87_RS04715 - ABC transporter substrate-binding protein, at 983,634 to 984,398 _RS04715
Group Condition ABZR87_RS04695 ABZR87_RS04700 ABZR87_RS04705 ABZR87_RS04710 ABZR87_RS04715
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.1 -1.6 -0.3 -0.4 -0.4
carbon source 4-Hydroxybenzoic Acid (C) -1.0 -0.2 -1.3 +0.1 +0.3
soil soil EcoFAB sample 1; outgrowth in LB -1.4 -1.0 +0.1 +0.0 +0.3
root root EcoFAB sample 1; outgrowth in LB +0.3 -1.5 -0.2 -0.4 -0.2
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.2 -1.2 -0.2 -0.3 -0.1
root root EcoFAB sample 2; outgrowth in LB -0.4 -1.4 -0.1 +0.0 -0.0
rhizosphere rhizosphere sample 3; outgrowth in LB -1.0 -0.5 -0.2 -0.3 +0.1
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.1 -0.8 -0.4 -0.2 +0.0
rhizosphere rhizosphere sample 1; outgrowth in LB -0.5 -0.5 -0.1 -0.2 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.2 -0.2 +0.2 +0.0 +0.0
soil soil EcoFAB sample 2; outgrowth in LB +0.5 -1.3 -0.1 -0.2 -0.1
carbon source Sebacic (C) -1.2 +0.2 +0.0 -0.3 +0.0
nitrogen source nitrogen source nitrate 5mM -0.9 +0.1 -0.1 -0.1 -0.1
phage Ra3_1 -1.2 +0.1 +0.2 -0.2 +0.1
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +0.3 -0.9 -0.1 -0.0 -0.1
soil soil sample 4; outgrowth in LB -0.6 +0.1 -0.2 -0.1 +0.0
carbon source propionate (C) -0.4 +0.0 -0.4 -0.1 +0.1
carbon source Sebacic (C) +0.3 -0.2 -0.2 -0.2 -0.2
nitrogen source nitrogen source nitrite 0.5mM -0.7 +0.0 -0.1 +0.1 +0.3
rhizosphere rhizosphere sample 9; outgrowth in LB +0.7 -0.6 -0.0 -0.2 -0.2
nitrogen source nitrogen source nitrite 0.5mM -0.6 +0.2 -0.4 +0.1 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.2 +0.2 -0.2 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +0.0 +0.2 -0.0 -0.2
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 +0.0 -0.2 +0.6 +0.3
root root sample 6; outgrowth in LB +0.7 -0.2 -0.2 +0.2 +0.1
carbon source Octanoic (C) +1.0 +0.4 -0.4 -0.0 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +0.2 +0.5 -0.2 +0.1
root root sample 5; outgrowth in LB +0.9 -0.2 +0.5 -0.1 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.4 +0.6 -0.1 +0.0
carbon source Octanoic (C) +0.9 +0.2 -0.3 +0.0 +0.3
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ABZR87_RS04700
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