Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS04515 and ABZR87_RS04520 are separated by 15 nucleotidesABZR87_RS04520 and ABZR87_RS04525 are separated by 655 nucleotidesABZR87_RS04525 and ABZR87_RS04530 are separated by 137 nucleotidesABZR87_RS04530 and ABZR87_RS04535 are separated by 942 nucleotides ABZR87_RS04515: ABZR87_RS04515 - potassium-transporting ATPase subunit KdpB, at 941,010 to 943,235 _RS04515 ABZR87_RS04520: ABZR87_RS04520 - potassium-transporting ATPase subunit KdpC, at 943,251 to 943,874 _RS04520 ABZR87_RS04525: ABZR87_RS04525 - sensor histidine kinase KdpD, at 944,530 to 947,346 _RS04525 ABZR87_RS04530: ABZR87_RS04530 - MetQ/NlpA family lipoprotein, at 947,484 to 948,290 _RS04530 ABZR87_RS04535: ABZR87_RS04535 - EAL domain-containing protein, at 949,233 to 950,447 _RS04535
Group Condition ABZR87_RS04515 ABZR87_RS04520 ABZR87_RS04525 ABZR87_RS04530 ABZR87_RS04535
carbon source Sebacic (C) -0.0 -0.2 -0.4 -0.2 -0.5
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.4 -0.1 +0.1 -0.2 -0.6
nitrogen source nitrogen source nitrite 0.5mM +0.0 -0.0 +0.0 -0.0 -0.8
nitrogen source nitrogen source nitrite 0.5mM -0.1 -0.0 -0.1 +0.1 -0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 -0.2 -0.1 -0.3 -0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 +0.6 -0.0 -0.7 -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 +0.2 -0.1 -0.1 +0.0
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.3 -0.3 -0.1 -0.1 +0.4
rhizosphere rhizosphere sample 3; outgrowth in LB +0.3 -0.6 -0.1 -0.1 +0.1
soil soil sample 4; outgrowth in LB +0.2 -0.2 -0.3 -0.1 +0.2
rhizosphere rhizosphere sample 2; outgrowth in LB -0.1 +0.2 +0.0 -0.6 +0.2
soil soil sample 8; outgrowth in LB -0.1 +0.0 -0.2 -0.2 +0.4
root root sample 6; outgrowth in LB +0.3 -0.4 -0.0 -0.4 +0.4
rhizosphere rhizosphere sample 5; outgrowth in LB +0.4 -0.0 -0.2 +0.2 -0.4
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.5 +0.3 +0.6 -0.3
rhizosphere rhizosphere sample 9; outgrowth in LB +0.1 +0.5 -0.3 +0.0 -0.1
root root EcoFAB sample 1; outgrowth in LB -0.2 -0.0 -0.2 +0.1 +0.6
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.2 -0.1 -0.2 +0.2 +0.3
rhizosphere rhizosphere sample 6; outgrowth in LB +0.2 -0.1 -0.2 -0.1 +0.5
rhizosphere rhizosphere sample 8; outgrowth in LB +0.2 +0.2 -0.0 -0.3 +0.4
soil soil EcoFAB sample 1; outgrowth in LB -0.2 -0.2 -0.3 +0.4 +0.8
carbon source L-Glutamic (C) +0.1 +0.2 +0.1 -0.3 +0.4
soil soil EcoFAB sample 2; outgrowth in LB +0.2 -0.2 +0.1 +0.1 +0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.2 +0.3 +0.0 +0.1 +0.5
root root sample 5; outgrowth in LB +0.7 +0.3 -0.0 +0.4 -0.2
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.2 +0.0 -0.1 +0.4 +0.7
carbon source Heptanoic (C) +0.7 +0.8 -0.1 +0.2 -0.3
carbon source Heptanoic (C) +0.9 +0.9 -0.0 +0.2 -0.3
carbon source Octanoic (C) +1.2 +1.7 -0.0 -0.5 -0.1
carbon source Octanoic (C) +1.9 +1.3 -0.2 +0.0 -0.0
remove
ABZR87_RS04515
plot
remove
ABZR87_RS04520
plot
remove
ABZR87_RS04525
remove
ABZR87_RS04530
plot
remove
ABZR87_RS04535
plot