Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS04510 and ABZR87_RS04515 are separated by 158 nucleotidesABZR87_RS04515 and ABZR87_RS04520 are separated by 15 nucleotidesABZR87_RS04520 and ABZR87_RS04525 are separated by 655 nucleotidesABZR87_RS04525 and ABZR87_RS04530 are separated by 137 nucleotides ABZR87_RS04510: ABZR87_RS04510 - potassium-transporting ATPase subunit KdpA, at 939,079 to 940,851 _RS04510 ABZR87_RS04515: ABZR87_RS04515 - potassium-transporting ATPase subunit KdpB, at 941,010 to 943,235 _RS04515 ABZR87_RS04520: ABZR87_RS04520 - potassium-transporting ATPase subunit KdpC, at 943,251 to 943,874 _RS04520 ABZR87_RS04525: ABZR87_RS04525 - sensor histidine kinase KdpD, at 944,530 to 947,346 _RS04525 ABZR87_RS04530: ABZR87_RS04530 - MetQ/NlpA family lipoprotein, at 947,484 to 948,290 _RS04530
Group Condition ABZR87_RS04510 ABZR87_RS04515 ABZR87_RS04520 ABZR87_RS04525 ABZR87_RS04530
root root sample 6; outgrowth in LB -0.1 +0.3 -0.4 -0.0 -0.4
carbon source Sebacic (C) +0.3 -0.0 -0.2 -0.4 -0.2
rhizosphere rhizosphere sample 3; outgrowth in LB -0.1 +0.3 -0.6 -0.1 -0.1
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.2 -0.3 -0.3 -0.1 -0.1
rhizosphere rhizosphere sample 2; outgrowth in LB -0.1 -0.1 +0.2 +0.0 -0.6
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.3 +0.2 -0.1 -0.2 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 -0.4 +0.2 -0.1 -0.1
soil soil sample 4; outgrowth in LB +0.0 +0.2 -0.2 -0.3 -0.1
soil soil sample 8; outgrowth in LB +0.3 -0.1 +0.0 -0.2 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.5 -0.2 -0.1 -0.3
soil soil EcoFAB sample 1; outgrowth in LB +0.0 -0.2 -0.2 -0.3 +0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 -0.0 +0.6 -0.0 -0.7
carbon source 4-Hydroxybenzoic Acid (C) -0.3 -0.2 +0.3 +0.0 +0.1
rhizosphere rhizosphere sample 7; outgrowth in LB +0.2 +0.1 +0.0 -0.2 -0.3
nitrogen source nitrogen source nitrate 5mM +0.0 -0.2 +0.1 -0.3 +0.2
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.1 +0.2 -0.1 -0.2 +0.2
carbon source L-Glutamic (C) -0.1 +0.1 +0.2 +0.1 -0.3
rhizosphere rhizosphere sample 1; outgrowth in LB +0.1 +0.2 +0.2 -0.2 -0.2
rhizosphere rhizosphere sample 5; outgrowth in LB -0.1 +0.4 -0.0 -0.2 +0.2
rhizosphere rhizosphere sample 8; outgrowth in LB +0.3 +0.2 +0.2 -0.0 -0.3
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 -0.1 -0.5 +0.3 +0.6
rhizosphere rhizosphere sample 9; outgrowth in LB +0.1 +0.1 +0.5 -0.3 +0.0
carbon source Lauric (C) +0.2 -0.1 -0.0 -0.1 +0.4
carbon source Dodecandioic (C) +0.3 +0.2 +0.2 -0.1 +0.1
carbon source Sebacic (C) +0.3 +0.2 -0.1 -0.0 +0.3
root root sample 5; outgrowth in LB -0.4 +0.7 +0.3 -0.0 +0.4
carbon source Heptanoic (C) +0.6 +0.7 +0.8 -0.1 +0.2
carbon source Heptanoic (C) +0.6 +0.9 +0.9 -0.0 +0.2
carbon source Octanoic (C) +0.2 +1.2 +1.7 -0.0 -0.5
carbon source Octanoic (C) +1.0 +1.9 +1.3 -0.2 +0.0
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