Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS04225 and ABZR87_RS04230 are separated by 75 nucleotidesABZR87_RS04230 and ABZR87_RS04235 overlap by 4 nucleotidesABZR87_RS04235 and ABZR87_RS04240 are separated by 145 nucleotidesABZR87_RS04240 and ABZR87_RS04245 are separated by 65 nucleotides ABZR87_RS04225: ABZR87_RS04225 - alpha/beta hydrolase, at 883,245 to 884,114 _RS04225 ABZR87_RS04230: ABZR87_RS04230 - Cu(I)-responsive transcriptional regulator, at 884,190 to 884,648 _RS04230 ABZR87_RS04235: ABZR87_RS04235 - heavy metal translocating P-type ATPase, at 884,645 to 886,867 _RS04235 ABZR87_RS04240: ABZR87_RS04240 - heavy-metal-associated domain-containing protein, at 887,013 to 887,225 _RS04240 ABZR87_RS04245: ABZR87_RS04245 - OmpW family protein, at 887,291 to 888,019 _RS04245
Group Condition ABZR87_RS04225 ABZR87_RS04230 ABZR87_RS04235 ABZR87_RS04240 ABZR87_RS04245
carbon source Octanoic (C) -0.7 -0.6 +0.4 -3.8 -2.7
carbon source Sebacic (C) -1.0 +0.2 -0.6 -0.9 -4.9
carbon source Heptanoic (C) -0.5 +0.3 -0.1 -1.0 -1.2
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.1 -0.1 -2.3 -0.2 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.3 -0.3 -1.5 -0.2
carbon source Octanoic (C) -0.2 -0.4 +0.8 -0.5 -2.1
carbon source Azelaic (C) -0.3 +0.0 +0.2 +0.7 -2.8
carbon source Dodecandioic (C) -0.5 +0.1 +0.1 -0.5 -1.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.9 +0.5 -1.2 -0.3 -0.0
soil soil EcoFAB sample 1; outgrowth in LB -0.4 -0.3 -2.5 +1.2 +0.1
soil soil sample 8; outgrowth in LB -0.1 -0.2 -1.2 -0.4 +0.0
carbon source Dodecandioic (C) -0.9 -0.1 +0.1 +0.4 -1.4
soil soil EcoFAB sample 2; outgrowth in LB -0.4 +0.1 -1.5 +0.3 -0.0
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.0 +0.1 -1.9 +0.4 -0.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.0 -0.0 -1.7 +0.2 +0.1
carbon source Disodium Glutarate (C) +0.3 -0.3 +0.1 -1.3 -0.2
soil soil sample 9; outgrowth in LB -0.0 -0.2 -1.5 +0.3 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 +0.1 -1.3 +0.7 -0.1
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.5 +0.2 -0.9 +0.4 -0.1
carbon source Protocatechuic Acid (C) -0.0 -0.1 +0.7 -0.2 -1.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 +0.4 -0.7 +0.2 -0.2
soil soil sample 3; outgrowth in LB +0.1 -0.1 -1.2 +0.5 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.1 -0.1 -1.0 -1.0 +0.4
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +0.2 -0.1 -1.1 +0.0 +0.7
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.3 -0.2 -1.5 +0.8 +0.2
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.5 -0.1 -1.2 +0.5 +0.3
root root EcoFAB sample 1; outgrowth in LB -0.2 +0.3 -1.2 +1.2 -0.1
rhizosphere rhizosphere sample 8; outgrowth in LB +0.0 -0.1 -0.9 +0.8 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 -0.3 -1.1 +0.8 +0.1
carbon source L-Glutamic (C) +2.6 +0.4 -0.1 -1.2 +0.0
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