Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS04165	ABZR87_RS04170	ABZR87_RS04175	ABZR87_RS04180	ABZR87_RS04185
carbon source	Sebacic (C)	-0.1	-0.1	-0.4	-1.3	-0.6
root	root sample 6; outgrowth in LB	-0.4	-0.4	-0.8	-0.1	-0.1
root	root sample 5; outgrowth in LB	-0.0	-0.2	-0.2	-0.7	-0.5
rhizosphere	rhizosphere sample 6; outgrowth in LB	-0.2	-0.2	-0.1	-0.3	-0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-0.2	-0.3	-0.1	-0.7
carbon source	Heptanoic (C)	-0.1	+0.2	+0.0	-0.3	-1.0
phage	Ra1_0.1	-0.0	-0.2	-0.1	-0.7	-0.3
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	-0.1	-0.1	-0.0	-0.2	-0.7
carbon source	Lauric (C)	-0.3	-0.1	-0.1	-0.2	-0.4
carbon source	Disodium Glutarate (C)	-0.4	+0.2	-0.3	-0.2	-0.3
nitrogen source	nitrogen source nitrate 20mM	+0.3	-0.1	-0.6	-0.2	-0.3
nitrogen source	nitrogen source nitrate 5mM	+0.0	+0.3	+0.0	-0.8	-0.3
carbon source	Suberic (C)	-0.1	-0.2	-0.2	+0.2	-0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	+0.3	-0.1	+0.1	-0.7
carbon source	adipate (C)	-0.3	+0.3	-0.0	+0.1	-0.6
carbon source	Hexanoic (C)	-0.2	+0.3	-0.2	-0.3	-0.2
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	-0.4	-0.3	+0.2	+0.1	-0.1
rhizosphere	rhizosphere sample 9; outgrowth in LB	-0.3	-0.3	+0.3	+0.3	-0.4
carbon source	propionate (C)	-0.1	+0.1	+0.1	+0.3	-0.4
root	root EcoFAB sample 1; outgrowth in LB	+0.2	+0.0	+0.3	-0.6	-0.0
root	root EcoFAB sample 2; outgrowth in LB	-0.3	-0.0	-0.0	-0.1	+0.6
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.1	+0.1	+0.4	+0.2	-0.4
rhizosphere	rhizosphere sample 7; outgrowth in LB	-0.1	-0.0	+0.4	+0.2	-0.3
phage	Ra3_0.01	-0.0	-0.2	+0.3	-0.2	+0.4
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.1	+0.1	+0.1	+0.5	-0.3
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.4	-0.2	-0.4	+0.6	-0.1
rhizosphere	rhizosphere sample 3; outgrowth in LB	+0.1	+0.5	+0.4	+0.1	-0.7
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-0.3	+0.1	+0.3	+0.2	+0.2
soil	soil sample 3; outgrowth in LB	+0.2	-0.2	+0.3	+0.0	+0.4
carbon source	Octanoic (C)	+0.3	+0.2	+0.0	+1.0	-0.5