Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABZR87_RS03950	ABZR87_RS03955	ABZR87_RS03960	ABZR87_RS03965	ABZR87_RS03970
carbon source	Octanoic (C)	-0.7	-2.5	-3.1	-0.2	-1.2
carbon source	Octanoic (C)	-0.1	-3.1	-2.7	-0.3	-1.0
carbon source	Dodecandioic (C)	+0.3	-1.5	-2.3	-0.3	-0.3
carbon source	Sebacic (C)	-0.7	-1.2	-1.4	-0.2	-0.3
carbon source	Dodecandioic (C)	+0.2	-1.7	-1.8	-0.3	-0.3
carbon source	Heptanoic (C)	-0.3	-0.8	-0.9	-0.0	-0.8
carbon source	Heptanoic (C)	+0.3	-0.8	-0.7	+0.0	-0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.8	-0.2	-0.2	-0.1	-0.4
soil	soil EcoFAB sample 1; outgrowth in LB	-0.8	+0.1	+0.3	+0.2	-1.2
soil	soil sample 5; outgrowth in LB	-1.2	+0.2	-0.1	+0.1	-0.5
root	root sample 5; outgrowth in LB	-1.0	-0.5	+0.3	+0.0	-0.2
soil	soil EcoFAB sample 2; outgrowth in LB	-1.5	+0.3	+0.4	+0.2	-0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.6	-0.0	-0.6	+0.3	-0.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.8	+0.3	+0.1	+0.1	-0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.8	+0.4	-0.1	-0.0	-0.4
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.2	+0.4	+0.4	+0.1	-0.2
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	+0.2	+0.2	+0.3	+0.1	-1.0
rhizosphere	rhizosphere sample 7; outgrowth in LB	+0.8	+0.1	-0.2	-0.3	-0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.7	+0.5	+0.4	+0.4	-0.3
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	-0.0	+0.5	+0.6	-0.0	-0.6
carbon source	Beta-alanine (C)	-0.4	+0.2	+0.3	+0.1	+0.8
carbon source	Protocatechuic Acid (C)	-0.2	+0.8	+0.8	-0.2	-0.3
root	root EcoFAB sample 2; outgrowth in LB	+0.4	+0.2	+0.7	+0.4	-0.6
phage	Ra1_0.1	+0.6	+0.1	+0.7	-0.1	-0.2
carbon source	Protocatechuic Acid (C)	+0.0	+0.5	+0.9	+0.1	-0.3
carbon source	Disodium Glutarate (C)	+0.5	+0.6	+0.7	+0.1	-0.2
phage	Ra3_1	+1.4	+0.4	+0.2	+0.0	-0.0
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	+0.1	+1.4	+1.5	+0.7	-0.2
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	+0.2	+2.9	+3.0	+0.3	-0.8
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	-0.0	+2.2	+2.4	+2.4	+0.8