Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS03840 and ABZR87_RS03845 are separated by 646 nucleotidesABZR87_RS03845 and ABZR87_RS03850 are separated by 94 nucleotidesABZR87_RS03850 and ABZR87_RS03855 overlap by 4 nucleotidesABZR87_RS03855 and ABZR87_RS03860 are separated by 343 nucleotides ABZR87_RS03840: ABZR87_RS03840 - arsenate reductase (glutaredoxin), at 792,709 to 793,056 _RS03840 ABZR87_RS03845: ABZR87_RS03845 - M20/M25/M40 family metallo-hydrolase, at 793,703 to 794,977 _RS03845 ABZR87_RS03850: ABZR87_RS03850 - ureidoglycolate lyase, at 795,072 to 795,599 _RS03850 ABZR87_RS03855: ABZR87_RS03855 - allantoicase, at 795,596 to 796,606 _RS03855 ABZR87_RS03860: ABZR87_RS03860 - C4-dicarboxylate transporter DctA, at 796,950 to 798,290 _RS03860
Group Condition ABZR87_RS03840 ABZR87_RS03845 ABZR87_RS03850 ABZR87_RS03855 ABZR87_RS03860
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.2 -0.1 -3.8 -0.8 +0.3
soil soil EcoFAB sample 1; outgrowth in LB -0.9 +0.0 -3.0 -0.3 -0.2
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.1 +0.2 -3.7 -0.8 +0.2
root root sample 5; outgrowth in LB +0.3 -0.0 -3.5 -0.5 +0.1
soil soil EcoFAB sample 2; outgrowth in LB -0.3 +0.1 -2.8 -0.5 -0.0
root root EcoFAB sample 1; outgrowth in LB -0.4 -0.1 -2.4 -0.8 +0.1
root root EcoFAB sample 2; outgrowth in LB -0.2 -0.2 -2.2 -0.8 -0.1
root root sample 4; outgrowth in LB -0.4 -0.0 -2.0 -0.4 -0.0
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.5 +0.2 -1.7 -0.4 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.5 -0.0 -0.8 -0.3 +0.1
rhizosphere rhizosphere sample 9; outgrowth in LB +0.3 +0.1 -2.2 -0.5 +0.1
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.0 +0.1 -1.9 -0.4 +0.1
root root sample 6; outgrowth in LB -0.6 +0.3 -1.6 -0.4 +0.2
rhizosphere rhizosphere sample 5; outgrowth in LB -0.1 +0.0 -1.6 -0.2 -0.1
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.1 +0.0 -1.5 -0.3 -0.0
rhizosphere rhizosphere sample 4; outgrowth in LB +0.0 -0.0 -1.6 -0.3 -0.1
rhizosphere rhizosphere sample 7; outgrowth in LB -0.1 +0.1 -1.6 -0.2 -0.1
rhizosphere rhizosphere sample 3; outgrowth in LB -0.4 +0.1 -1.1 -0.4 -0.0
rhizosphere rhizosphere sample 8; outgrowth in LB -0.2 +0.0 -1.4 -0.3 +0.2
rhizosphere rhizosphere sample 1; outgrowth in LB -0.2 +0.1 -1.4 -0.4 +0.2
soil soil sample 1; outgrowth in LB -0.4 -0.1 -1.1 -0.1 +0.0
soil soil sample 9; outgrowth in LB -0.6 -0.0 -0.6 -0.3 -0.1
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.2 +0.3 -1.5 -0.5 -0.1
rhizosphere rhizosphere sample 6; outgrowth in LB +0.3 +0.1 -1.4 -0.3 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.2 -0.9 -0.4 -0.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.2 +0.1 -1.2 -0.1 -0.0
rhizosphere rhizosphere sample 2; outgrowth in LB +0.3 +0.0 -1.4 -0.3 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -0.1 -0.7 -0.1 +0.3
no_plant_soil no_plant_soil sample 2; outgrowth in LB +0.3 +0.1 -1.3 -0.2 +0.2
micoeukaryotes C.elegans, mixed culture-2 +0.3 +0.0 -0.8 -0.3 +0.2
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