Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS03815 and ABZR87_RS03820 are separated by 29 nucleotidesABZR87_RS03820 and ABZR87_RS03825 are separated by 201 nucleotidesABZR87_RS03825 and ABZR87_RS03830 overlap by 4 nucleotidesABZR87_RS03830 and ABZR87_RS03835 are separated by 273 nucleotides ABZR87_RS03815: ABZR87_RS03815 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 788,785 to 789,687 _RS03815 ABZR87_RS03820: ABZR87_RS03820 - septal ring lytic transglycosylase RlpA family protein, at 789,717 to 790,448 _RS03820 ABZR87_RS03825: ABZR87_RS03825 - MBL fold metallo-hydrolase, at 790,650 to 791,306 _RS03825 ABZR87_RS03830: ABZR87_RS03830 - exonuclease, at 791,303 to 792,031 _RS03830 ABZR87_RS03835: ABZR87_RS03835 - hypothetical protein, at 792,305 to 792,580 _RS03835
Group Condition ABZR87_RS03815 ABZR87_RS03820 ABZR87_RS03825 ABZR87_RS03830 ABZR87_RS03835
carbon source Octanoic (C) -1.0 -0.3 -0.4 +0.1 N.D.
carbon source Octanoic (C) -0.4 -0.8 -0.4 +0.3 N.D.
carbon source Disodium Glutarate (C) -0.4 -0.3 -0.4 -0.2 N.D.
root root sample 6; outgrowth in LB -0.8 -0.1 +0.0 -0.3 N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB -0.1 -0.2 -0.8 -0.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.7 +0.0 -0.4 N.D.
carbon source Pimelic (C) -0.4 -0.1 -0.2 -0.3 N.D.
carbon source Heptanoic (C) +0.0 -0.3 -0.6 -0.1 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB -0.3 +0.1 -0.1 -0.6 N.D.
root root EcoFAB sample 1; outgrowth in LB -0.7 +0.2 -0.5 +0.1 N.D.
nitrogen source nitrogen source nitrite 5mM -0.3 -0.1 -0.5 +0.0 N.D.
root root EcoFAB sample 2; outgrowth in LB -0.8 +0.0 +0.4 -0.4 N.D.
carbon source Lauric (C) -0.6 -0.3 +0.1 +0.1 N.D.
carbon source D-Galactose (C) -0.5 -0.1 -0.2 +0.1 N.D.
soil soil EcoFAB sample 1; outgrowth in LB -0.4 -0.8 +0.5 +0.3 N.D.
soil soil EcoFAB sample 2; outgrowth in LB -0.3 -0.4 -0.0 +0.3 N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.6 -0.2 +0.2 +0.2 N.D.
carbon source Azelaic (C) -0.7 +0.3 -0.1 +0.2 N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.3 -0.2 -0.1 +0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.4 -0.3 +0.7 N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -0.3 +0.4 -0.1 -0.1 N.D.
soil soil sample 3; outgrowth in LB -0.0 -0.3 -0.2 +0.5 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 -0.2 -0.1 -0.2 N.D.
nitrogen source nitrogen source nitrite 1mM +0.3 -0.1 +0.2 -0.4 N.D.
carbon source Sebacic (C) -0.3 -0.6 +0.5 +0.7 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 -0.2 +0.4 +0.1 N.D.
nitrogen source nitrogen source nitrate 20mM +0.1 -0.2 +0.1 +0.5 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.1 -0.2 +0.9 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +0.3 +0.2 -0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.5 +0.8 +0.8 N.D.
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