Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS03610 and ABZR87_RS03615 are separated by 189 nucleotidesABZR87_RS03615 and ABZR87_RS03620 are separated by 33 nucleotidesABZR87_RS03620 and ABZR87_RS03625 are separated by 105 nucleotidesABZR87_RS03625 and ABZR87_RS03630 are separated by 109 nucleotides ABZR87_RS03610: ABZR87_RS03610 - hypothetical protein, at 758,119 to 758,760 _RS03610 ABZR87_RS03615: ABZR87_RS03615 - Hsp20/alpha crystallin family protein, at 758,950 to 759,393 _RS03615 ABZR87_RS03620: ABZR87_RS03620 - Hsp20/alpha crystallin family protein, at 759,427 to 759,846 _RS03620 ABZR87_RS03625: ABZR87_RS03625 - hypothetical protein, at 759,952 to 760,197 _RS03625 ABZR87_RS03630: ABZR87_RS03630 - DUF892 family protein, at 760,307 to 760,819 _RS03630
Group Condition ABZR87_RS03610 ABZR87_RS03615 ABZR87_RS03620 ABZR87_RS03625 ABZR87_RS03630
root root sample 6; outgrowth in LB -0.4 -0.3 N.D. -2.1 +0.1
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -0.4 N.D. -1.1 -0.1
rhizosphere rhizosphere sample 1; outgrowth in LB -0.5 -0.5 N.D. -0.7 -0.3
rhizosphere rhizosphere sample 9; outgrowth in LB -0.0 -0.4 N.D. -0.7 -0.4
nitrogen source nitrogen source nitrate 20mM +0.1 +0.0 N.D. -1.1 -0.2
nitrogen source nitrogen source nitrite 0.5mM +0.0 -0.5 N.D. -0.5 -0.2
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.4 +0.1 N.D. -0.8 -0.0
carbon source Hexanoic (C) +0.0 -0.4 N.D. -0.6 -0.2
carbon source Dodecandioic (C) +0.1 +0.1 N.D. -1.2 -0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.3 N.D. -0.9 +0.1
carbon source propionate (C) +0.1 -0.0 N.D. -1.2 +0.0
root root sample 5; outgrowth in LB -0.7 -0.4 N.D. +0.2 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.2 N.D. -0.7 -0.5
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.6 -0.4 N.D. +0.0 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 +0.4 N.D. -0.7 +0.1
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.2 +0.2 N.D. -0.8 +0.3
micoeukaryotes C.elegans, mixed culture-2 -0.4 +0.5 N.D. -0.3 -0.0
soil soil sample 4; outgrowth in LB -0.3 -0.2 N.D. +0.5 -0.2
soil soil sample 9; outgrowth in LB -0.3 -0.4 N.D. +0.5 +0.0
carbon source Azelaic (C) +0.2 -0.8 N.D. +0.4 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.4 N.D. -0.4 -0.4
carbon source Sebacic (C) -0.4 +0.2 N.D. +0.6 -0.0
carbon source Disodium Glutarate (C) +0.4 -0.5 N.D. +0.9 -0.2
carbon source Pimelic (C) -0.2 +0.1 N.D. +0.8 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.2 -0.5 N.D. +1.2 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +0.6 N.D. +0.1 -0.2
carbon source Octanoic (C) -0.1 +0.3 N.D. +0.7 +0.1
rhizosphere rhizosphere sample 8; outgrowth in LB -0.4 +0.6 N.D. +1.0 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +0.7 N.D. -0.0 +0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.3 N.D. +1.9 +0.6
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ABZR87_RS03610
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ABZR87_RS03615
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