Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS03605 and ABZR87_RS03610 are separated by 173 nucleotidesABZR87_RS03610 and ABZR87_RS03615 are separated by 189 nucleotidesABZR87_RS03615 and ABZR87_RS03620 are separated by 33 nucleotidesABZR87_RS03620 and ABZR87_RS03625 are separated by 105 nucleotides ABZR87_RS03605: ABZR87_RS03605 - co-chaperone GroES, at 757,628 to 757,945 _RS03605 ABZR87_RS03610: ABZR87_RS03610 - hypothetical protein, at 758,119 to 758,760 _RS03610 ABZR87_RS03615: ABZR87_RS03615 - Hsp20/alpha crystallin family protein, at 758,950 to 759,393 _RS03615 ABZR87_RS03620: ABZR87_RS03620 - Hsp20/alpha crystallin family protein, at 759,427 to 759,846 _RS03620 ABZR87_RS03625: ABZR87_RS03625 - hypothetical protein, at 759,952 to 760,197 _RS03625
Group Condition ABZR87_RS03605 ABZR87_RS03610 ABZR87_RS03615 ABZR87_RS03620 ABZR87_RS03625
root root sample 6; outgrowth in LB -0.4 -0.4 -0.3 N.D. -2.1
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -0.5 -0.4 N.D. -1.1
carbon source Octanoic (C) -1.9 -0.4 +0.0 N.D. +0.2
root root sample 5; outgrowth in LB -0.9 -0.7 -0.4 N.D. +0.2
rhizosphere rhizosphere sample 1; outgrowth in LB -0.0 -0.5 -0.5 N.D. -0.7
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 +0.1 -0.3 N.D. -0.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -0.5 +0.4 N.D. -0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.9 +0.2 +0.0 N.D. -0.5
soil soil sample 9; outgrowth in LB -0.9 -0.3 -0.4 N.D. +0.5
rhizosphere rhizosphere sample 5; outgrowth in LB -1.0 +0.1 -0.1 N.D. +0.4
rhizosphere rhizosphere sample 3; outgrowth in LB -0.9 -0.2 +0.5 N.D. +0.1
soil soil sample 1; outgrowth in LB -1.0 +0.2 +0.0 N.D. +0.4
carbon source Hexanoic (C) +0.7 +0.0 -0.4 N.D. -0.6
soil soil sample 8; outgrowth in LB -0.9 +0.0 +0.3 N.D. +0.4
carbon source propionate (C) +0.9 +0.1 -0.0 N.D. -1.2
carbon source 4-Hydroxybenzoic Acid (C) -0.9 +0.2 -0.5 N.D. +1.2
carbon source Lauric (C) +0.8 -0.1 +0.1 N.D. -0.8
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -0.1 +0.7 N.D. +0.1
micoeukaryotes C.elegans, mixed culture-2 +0.4 -0.4 +0.5 N.D. -0.3
rhizosphere rhizosphere sample 4; outgrowth in LB -0.6 +0.1 +0.1 N.D. +0.7
carbon source butyrate (C) +1.0 -0.1 -0.2 N.D. -0.2
rhizosphere rhizosphere sample 8; outgrowth in LB -0.8 -0.4 +0.6 N.D. +1.0
carbon source Azelaic (C) +0.7 +0.2 -0.8 N.D. +0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 +0.4 +0.7 N.D. -0.0
carbon source propionate (C) +1.1 +0.1 -0.1 N.D. -0.4
carbon source Hexanoic (C) +0.6 -0.2 -0.2 N.D. +0.5
carbon source succinate (C) +0.5 +0.6 -0.3 N.D. +0.2
carbon source Disodium Glutarate (C) +0.4 +0.4 -0.5 N.D. +0.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.9 +0.3 +0.4 N.D. -0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.2 +0.4 +1.3 N.D. +1.9
remove
ABZR87_RS03605
plot		 remove
ABZR87_RS03610
plot		 remove
ABZR87_RS03615		 remove
ABZR87_RS03620
plot		 remove
ABZR87_RS03625
plot