Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS03455	ABZR87_RS03460	ABZR87_RS03465	ABZR87_RS03470	ABZR87_RS03475
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-4.0	-4.0	+0.1	+0.1	-0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-4.0	-3.5	-0.2	+0.0	-0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.4	-3.3	-0.3	-0.1	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.2	-2.5	-0.2	-0.0	-0.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.0	-3.1	+0.0	-0.1	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-2.5	-2.9	-0.1	-0.2	-0.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.2	-2.5	+0.2	+0.1	+0.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-2.6	-2.9	-0.0	+0.3	-0.1
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	-2.3	-2.7	-0.1	+0.1	-0.1
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.9	-2.5	+0.0	+0.2	-0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-2.1	-2.3	-0.3	+0.0	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.9	-2.5	+0.0	+0.0	-0.0
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	-2.2	-2.3	+0.1	+0.2	+0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	-1.9	-2.0	+0.1	+0.1	-0.3
nitrogen source	nitrogen source nitrite 5mM	-1.5	-2.1	-0.1	-0.1	-0.0
nitrogen source	nitrogen source nitrite 5mM	-1.9	-1.6	-0.1	-0.0	-0.0
rhizosphere	rhizosphere sample 6; outgrowth in LB	-1.7	-2.0	+0.0	+0.2	-0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	-1.8	-1.9	+0.1	+0.2	-0.0
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	-1.6	-2.0	+0.2	+0.2	-0.1
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.5	-2.1	+0.2	+0.0	+0.1
root	root sample 6; outgrowth in LB	-1.6	-2.0	-0.1	+0.5	+0.1
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	-1.4	-1.7	-0.1	+0.0	+0.1
rhizosphere	rhizosphere sample 7; outgrowth in LB	-1.2	-1.5	+0.0	+0.2	-0.3
soil	soil sample 3; outgrowth in LB	-1.2	-1.6	+0.0	-0.1	+0.1
root	root EcoFAB sample 1; outgrowth in LB	-1.5	-1.5	+0.1	+0.0	+0.1
root	root sample 5; outgrowth in LB	-1.4	-1.5	+0.4	-0.1	-0.1
rhizosphere	rhizosphere sample 8; outgrowth in LB	-1.1	-1.2	+0.0	+0.2	-0.1
soil	soil sample 6; outgrowth in LB	-1.2	-1.1	+0.1	+0.1	-0.1
soil	soil sample 5; outgrowth in LB	-1.1	-1.2	+0.1	-0.1	+0.1
soil	soil EcoFAB sample 2; outgrowth in LB	+1.6	+1.6	+0.1	-0.1	+0.2