Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS03320 and ABZR87_RS03325 are separated by 398 nucleotidesABZR87_RS03325 and ABZR87_RS03330 are separated by 30 nucleotidesABZR87_RS03330 and ABZR87_RS03335 are separated by 102 nucleotidesABZR87_RS03335 and ABZR87_RS03340 are separated by 12 nucleotides ABZR87_RS03320: ABZR87_RS03320 - NAD(P)H-dependent oxidoreductase, at 701,072 to 701,623 _RS03320 ABZR87_RS03325: ABZR87_RS03325 - GNAT family N-acetyltransferase, at 702,022 to 702,717 _RS03325 ABZR87_RS03330: ABZR87_RS03330 - MarR family transcriptional regulator, at 702,748 to 703,215 _RS03330 ABZR87_RS03335: ABZR87_RS03335 - hypothetical protein, at 703,318 to 703,671 _RS03335 ABZR87_RS03340: ABZR87_RS03340 - VOC family protein, at 703,684 to 704,076 _RS03340
Group Condition ABZR87_RS03320 ABZR87_RS03325 ABZR87_RS03330 ABZR87_RS03335 ABZR87_RS03340
soil soil EcoFAB sample 1; outgrowth in LB +0.1 -0.5 -1.8 -1.8 +0.0
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.5 -0.4 -1.5 -1.3 -0.1
soil soil EcoFAB sample 2; outgrowth in LB -0.1 -0.4 -2.2 -0.4 +0.0
root root EcoFAB sample 2; outgrowth in LB -0.3 -0.0 -1.6 -0.1 -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.1 -1.6 -0.7 +0.2
root root EcoFAB sample 1; outgrowth in LB +0.0 -0.1 -1.7 -0.3 -0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.8 +0.3 -1.8 -1.9 +0.4
carbon source 4-Hydroxybenzoic Acid (C) +0.0 -0.1 -0.2 -1.8 +0.0
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.1 -0.2 -1.8 +0.1 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.1 -1.4 -0.3 -0.2
carbon source D-Xylose (C) -0.4 -0.3 -0.4 -0.5 -0.3
soil soil sample 5; outgrowth in LB -0.2 -0.4 -1.3 +0.1 +0.1
carbon source Octanoic (C) -0.9 +0.5 -0.8 -0.4 -0.0
phage Ra1_0.1 -0.4 +0.1 -0.3 -0.7 -0.0
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.1 -0.0 -1.4 +0.2 +0.1
rhizosphere rhizosphere sample 6; outgrowth in LB -0.2 +0.2 -1.0 +0.1 -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 -0.1 -1.0 -0.4 +0.3
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.2 -0.3 -0.9 +0.5 +0.1
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.3 -0.1 -1.0 +0.2 -0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.1 -0.9 -0.2 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.4 -1.1 +0.1 +0.2
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.1 -0.3 -0.8 +0.5 -0.0
rhizosphere rhizosphere sample 1; outgrowth in LB -0.3 -0.2 -0.6 +0.6 +0.1
root root sample 6; outgrowth in LB -0.5 +0.2 +0.4 -0.6 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 +0.0 -1.1 +0.9 +0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.0 -0.5 +0.8 +0.2
carbon source Disodium Glutarate (C) +0.1 +0.2 -0.7 +0.5 +0.2
root root sample 5; outgrowth in LB +0.2 +0.5 -0.8 +0.4 +0.1
carbon source Octanoic (C) -0.7 +1.0 -0.1 +0.3 +0.4
carbon source Azelaic (C) -0.0 +0.4 -0.3 +1.1 +0.2
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ABZR87_RS03325
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